galaxy.tool_shed package¶
Subpackages¶
- galaxy.tool_shed.galaxy_install package
- Subpackages
- galaxy.tool_shed.galaxy_install.datatypes package
- galaxy.tool_shed.galaxy_install.metadata package
- galaxy.tool_shed.galaxy_install.migrate package
- Subpackages
- galaxy.tool_shed.galaxy_install.migrate.versions package
- Submodules
- galaxy.tool_shed.galaxy_install.migrate.versions.0001_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions.0002_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions.0003_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions.0004_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions.0005_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions.0006_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions.0007_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions.0008_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions.0009_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions.0010_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions.0011_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions.0012_tools module
- galaxy.tool_shed.galaxy_install.migrate.versions package
- Submodules
- galaxy.tool_shed.galaxy_install.migrate.check module
- galaxy.tool_shed.galaxy_install.migrate.common module
- Subpackages
- galaxy.tool_shed.galaxy_install.repository_dependencies package
- galaxy.tool_shed.galaxy_install.tool_dependencies package
- Subpackages
- galaxy.tool_shed.galaxy_install.tool_dependencies.recipe package
- Submodules
- galaxy.tool_shed.galaxy_install.tool_dependencies.recipe.asynchronous_reader module
- galaxy.tool_shed.galaxy_install.tool_dependencies.recipe.env_file_builder module
- galaxy.tool_shed.galaxy_install.tool_dependencies.recipe.install_environment module
- galaxy.tool_shed.galaxy_install.tool_dependencies.recipe.recipe_manager module
- galaxy.tool_shed.galaxy_install.tool_dependencies.recipe.step_handler module
- galaxy.tool_shed.galaxy_install.tool_dependencies.recipe.tag_handler module
- galaxy.tool_shed.galaxy_install.tool_dependencies.recipe package
- Submodules
- galaxy.tool_shed.galaxy_install.tool_dependencies.env_manager module
- Subpackages
- galaxy.tool_shed.galaxy_install.tools package
- Submodules
- galaxy.tool_shed.galaxy_install.install_manager module
- galaxy.tool_shed.galaxy_install.installed_repository_manager module
- galaxy.tool_shed.galaxy_install.tool_migration_manager module
- galaxy.tool_shed.galaxy_install.update_repository_manager module
- Subpackages
- galaxy.tool_shed.metadata package
- galaxy.tool_shed.tools package
- galaxy.tool_shed.util package
- Submodules
- galaxy.tool_shed.util.basic_util module
- galaxy.tool_shed.util.container_util module
- galaxy.tool_shed.util.hg_util module
- galaxy.tool_shed.util.metadata_util module
- galaxy.tool_shed.util.repository_util module
- galaxy.tool_shed.util.shed_util_common module
- galaxy.tool_shed.util.tool_dependency_util module
- galaxy.tool_shed.util.tool_util module
Submodules¶
galaxy.tool_shed.repository_type module¶
galaxy.tool_shed.tool_shed_registry module¶
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galaxy.tool_shed.tool_shed_registry.AUTH_TUPLE¶ alias of
galaxy.tool_shed.tool_shed_registry.AuthSetting
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class
galaxy.tool_shed.tool_shed_registry.Registry(config=None)[source]¶ Bases:
object-
url_auth(url)[source]¶ If the tool shed is using external auth, the client to the tool shed must authenticate to that as well. This provides access to the six.moves.urllib.request.HTTPPasswordMgrWithdefaultRealm() object for the url passed in.
Following more what galaxy.demo_sequencer.controllers.common does might be more appropriate at some stage…
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