Special Topics

• Galaxy FTP Uploads
  • Install some FTP server
  • Configure Galaxy
  • Allow your FTP server to read Galaxy’s database
  • Configuring ProFTPD
  • Further security measures
  • Other Links
• Galaxy InteractiveTools
  • How Galaxy InteractiveTools work
  • Some important benefits of using Galaxy InteractiveTools
  • Server-side configuration of Galaxy InteractiveTools
• Containers for Tool Dependencies
  • Automatic build of Linux containers
• Galactic Radio Telescope
  • Registration
  • About the Script
  • Data Privacy
  • Data Collection Process
  • Data Submission
• Galaxy Training Materials Webhook
  • Click to Run
  • Proxy Setup
• Job Metrics
  • Configuration
  • Available Plugins
  • Viewing Collected Data
  • Developing New Plugins
  • Future Plans
• Galaxy Webhooks
  • Plugin activation
  • Entry points
  • Plugin structure
  • config.yml
  • __init__.py
  • static files
  • Plugin dependencies
  • Issues
  • tool/workflow
• Storing secrets in the vault
  • Vault backends
  • Configuring Galaxy
  • Configuring vault_conf.yml
  • Vault configuration for Hashicorp Vault
  • Vault configuration for Custos
  • Vault configuration for database
  • Configuring user preferences to use the vault
  • Configuring file sources to use (user) secrets stored in a vault
• Galaxy Performance Tracking
  • Gunicorn
  • API / Route Timing Statistics
• Bug Reports
  • Email
  • JSON
  • Sentry
  • InfluxDB
  • GitHub
• GDPR Compliance
  • Audience
  • Configuration
  • Log Redaction
  • User Deletion
  • Backups
  • Tool Shed Specific