Galaxy Project
18.05

Release Notes

  • Releases
    • May 2018 Galaxy Release (v 18.05)
    • January 2018 Galaxy Release (v 18.01)
    • September 2017 Galaxy Release (v 17.09)
    • May 2017 Galaxy Release (v 17.05)
    • January 2017 Galaxy Release (v 17.01)
    • October 2016 Galaxy Release (v 16.10)
    • July 2016 Galaxy Release (v 16.07)
    • April 2016 Galaxy Release (v 16.04)
    • January 2016 Galaxy Release (v 16.01)
    • October 2015 Galaxy Release (v 15.10)
    • July 2015 Galaxy Release (v 15.07)
    • May 2015 Galaxy Release (v 15.05)
    • March 2015 Galaxy Release (v 15.03)
    • January 2015 Galaxy Release (v 15.01)
    • October 2014 Galaxy Release (v 14.10)
    • August 2014 Galaxy Release (v 14.08)
    • June 2014 Galaxy Release (v 14.06)
    • April 2014 Galaxy Release (v 14.04)
    • February 2014 Galaxy Release (v 14.02)
    • November 2013 Galaxy Release (v 13.11)
    • August 2013 Galaxy Release (v 13.08)
    • June 2013 Galaxy Release (v 13.06)
    • April 2013 Galaxy Release (v 13.04)
    • February 2013 Galaxy Release (v 13.02)
    • January 2013 Galaxy Release (v 13.01)
    • Galaxy Releases older than v 13.01

Admin Documentation

  • Administration
    • Galaxy Configuration
    • Logging Configuration
    • Production Environments
    • Scaling and Load Balancing
    • Proxying Galaxy with NGINX
    • Proxying Galaxy with Apache
    • Connecting to a Cluster
    • Galaxy Job Configuration
    • Tool Panel Administration
    • Authentication
    • Dependency Resolvers in Galaxy
    • Conda for Tool Dependencies
    • Framework Dependencies
    • Configuration Options
    • Galaxy Reports
    • Scripts & Tricks
  • Special topics
    • Galaxy FTP Uploads
    • Galaxy Interactive Environments
    • Containers for Tool Dependencies
    • Galactic Radio Telescope
    • Job Metrics
    • Galaxy Communication Server
    • Galaxy Webhooks
    • Galaxy Performance Tracking
    • Bug Reports
    • GDPR Compliance

Developer Documentation

  • Development
    • Galaxy Tool XML File
    • Build an Interactive Environment
    • Build a job runner
    • How Do I…
  • Galaxy API
    • Quickstart
    • Development Guidelines
    • Documentation
  • Tool Shed API
    • API Documentation
  • Application Documentation
    • galaxy package
    • galaxy_ext package
    • log_tempfile module
    • mimeparse module
    • psyco_full module
    • tool_shed package

About Project

  • Project Governance
    • Procedure Documents
    • Committers
    • Release branches
    • Handling Pull Requests
    • Issue Reporting
  • Issue Management
    • Issue Reporting
    • Milestones
    • Labeling Structure
    • The Roadmap
    • Voting
    • Automation
Galaxy Project
  • Docs »
  • Special Topics
  • View page source

Warning

This document is for an old release of Galaxy. You can alternatively view this page in the latest release if it exists or view the top of the latest release's documentation.

Special Topics¶

  • Galaxy FTP Uploads
    • Install some FTP server
    • Configure Galaxy
    • Allow your FTP server to read Galaxy’s database
    • Configuring ProFTPD
    • Further security measures
    • Other Links
  • Galaxy Interactive Environments
    • How GIEs Work
    • Deploying GIEs
  • Containers for Tool Dependencies
    • Automatic build of Linux containers
  • Galactic Radio Telescope
    • Registration
    • About the Script
    • Data Privacy
    • Data Collection Process
    • Data Submission
  • Job Metrics
    • Configuration
    • Available Plugins
    • Viewing Collected Data
    • Developing New Plugins
    • Future Plans
  • Galaxy Communication Server
    • Pre-requisites
    • Deploying the Server
    • Installing the Dependencies
    • Enabling the Chat Interace
    • Security Considerations
    • Keeping the Chat Server Running
  • Galaxy Webhooks
    • Plugin activation
    • Entry points
    • Plugin structure
    • config.yml
    • __init__.py
    • static files
    • Plugin dependencies
    • Issues
    • tool/workflow
  • Galaxy Performance Tracking
    • uWSGI
    • API / Route Timing Statistics
  • Bug Reports
    • Email
    • JSON
    • Sentry
    • InfluxDB
    • GitHub
  • GDPR Compliance
    • Audience
    • Configuration
    • Log Redaction
    • User Deletion
    • Backups
    • Tool Shed Specific
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