import logging
import os
from ..base import common
from ..base.twilltestcase import ShedTwillTestCase
log = logging.getLogger(__name__)
repository_name = "filtering_0310"
repository_description = "Galaxy's filtering tool for test 0310"
repository_long_description = "Long description of Galaxy's filtering tool for test 0310"
category_name = "Test 0310 - HTTP Repo features"
category_description = "Test 0310 for verifying the tool shed http interface to mercurial."
"""
1. Create a repository.
2. Clone the repository to a local path.
"""
[docs]class TestHgWebFeatures(ShedTwillTestCase):
"""Test http mercurial interface."""
[docs] def test_0000_initiate_users(self):
"""Create necessary user accounts and login as an admin user."""
self.login(email=common.test_user_1_email, username=common.test_user_1_name)
self.login(email=common.test_user_2_email, username=common.test_user_2_name)
self.login(email=common.admin_email, username=common.admin_username)
[docs] def test_0005_create_filtering_repository(self):
"""Create and populate the filtering_0310 repository.
We are at step 1 - Create a repository.
Create and populate the filtering_0310 repository.
"""
category = self.create_category(name=category_name, description=category_description)
self.login(email=common.test_user_1_email, username=common.test_user_1_name)
repository = self.get_or_create_repository(
name=repository_name,
description=repository_description,
long_description=repository_long_description,
owner=common.test_user_1_name,
category=category,
strings_displayed=[],
)
self.commit_tar_to_repository(
repository,
"filtering/filtering_1.1.0.tar",
commit_message="Uploaded filtering 1.1.0.",
)
[docs] def test_0010_clone(self):
"""Clone the repository to a local path.
We are at step 2 - Clone the repository to a local path.
The repository should have the following files:
filtering.py
filtering.xml
test-data/
test-data/1.bed
test-data/7.bed
test-data/filter1_in3.sam
test-data/filter1_inbad.bed
test-data/filter1_test1.bed
test-data/filter1_test2.bed
test-data/filter1_test3.sam
test-data/filter1_test4.bed
"""
repository = self._get_repository_by_name_and_owner(repository_name, common.test_user_1_name)
clone_path = self.generate_temp_path("test_0310", additional_paths=["filtering_0310", "user2"])
self.clone_repository(repository, clone_path)
files_in_repository = os.listdir(clone_path)
assert "filtering.py" in files_in_repository, "File not found in repository: filtering.py"