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Source code for tool_shed.test.functional.test_0310_hg_api_features

import logging
import os

from ..base.twilltestcase import (
    common,
    ShedTwillTestCase,
)

log = logging.getLogger(__name__)

repository_name = "filtering_0310"
repository_description = "Galaxy's filtering tool for test 0310"
repository_long_description = "Long description of Galaxy's filtering tool for test 0310"

category_name = "Test 0310 - HTTP Repo features"
category_description = "Test 0310 for verifying the tool shed http interface to mercurial."

"""
1. Create a repository.
2. Clone the repository to a local path.
"""


[docs]class TestHgWebFeatures(ShedTwillTestCase): """Test http mercurial interface."""
[docs] def test_0000_initiate_users(self): """Create necessary user accounts and login as an admin user.""" self.login(email=common.test_user_1_email, username=common.test_user_1_name) self.login(email=common.test_user_2_email, username=common.test_user_2_name) self.login(email=common.admin_email, username=common.admin_username)
[docs] def test_0005_create_filtering_repository(self): """Create and populate the filtering_0310 repository. We are at step 1 - Create a repository. Create and populate the filtering_0310 repository. """ category = self.create_category(name=category_name, description=category_description) self.login(email=common.test_user_1_email, username=common.test_user_1_name) repository = self.get_or_create_repository( name=repository_name, description=repository_description, long_description=repository_long_description, owner=common.test_user_1_name, category=category, strings_displayed=[], ) self.upload_file( repository, filename="filtering/filtering_1.1.0.tar", filepath=None, valid_tools_only=True, uncompress_file=True, remove_repo_files_not_in_tar=True, commit_message="Uploaded filtering 1.1.0.", strings_displayed=[], strings_not_displayed=[], ) self.upload_file( repository, filename="filtering/filtering_test_data.tar", filepath=None, valid_tools_only=True, uncompress_file=True, remove_repo_files_not_in_tar=False, commit_message="Uploaded filtering test data.", strings_displayed=[], strings_not_displayed=[], )
[docs] def test_0010_clone(self): """Clone the repository to a local path. We are at step 2 - Clone the repository to a local path. The repository should have the following files: filtering.py filtering.xml test-data/ test-data/1.bed test-data/7.bed test-data/filter1_in3.sam test-data/filter1_inbad.bed test-data/filter1_test1.bed test-data/filter1_test2.bed test-data/filter1_test3.sam test-data/filter1_test4.bed """ repository = self.test_db_util.get_repository_by_name_and_owner(repository_name, common.test_user_1_name) clone_path = self.generate_temp_path("test_0310", additional_paths=["filtering_0310", "user2"]) self.clone_repository(repository, clone_path) files_in_repository = os.listdir(clone_path) assert "filtering.py" in files_in_repository, "File not found in repository: filtering.py"