Galaxy Project
23.1

Release Notes

  • Releases
    • May 2022 Galaxy Release (v 22.05)
    • January 2022 Galaxy Release (v 22.01)
    • September 2021 Galaxy Release (v 21.09)
    • May 2021 Galaxy Release (v 21.05)
    • January 2021 Galaxy Release (v 21.01)
    • September 2020 Galaxy Release (v 20.09)
    • May 2020 Galaxy Release (v 20.05)
    • January 2020 Galaxy Release (v 20.01)
    • September 2019 Galaxy Release (v 19.09)
    • May 2019 Galaxy Release (v 19.05)
    • January 2019 Galaxy Release (v 19.01)
    • September 2018 Galaxy Release (v 18.09)
    • May 2018 Galaxy Release (v 18.05)
    • January 2018 Galaxy Release (v 18.01)
    • September 2017 Galaxy Release (v 17.09)
    • May 2017 Galaxy Release (v 17.05)
    • January 2017 Galaxy Release (v 17.01)
    • October 2016 Galaxy Release (v 16.10)
    • July 2016 Galaxy Release (v 16.07)
    • April 2016 Galaxy Release (v 16.04)
    • January 2016 Galaxy Release (v 16.01)
    • October 2015 Galaxy Release (v 15.10)
    • July 2015 Galaxy Release (v 15.07)
    • May 2015 Galaxy Release (v 15.05)
    • March 2015 Galaxy Release (v 15.03)
    • January 2015 Galaxy Release (v 15.01)
    • October 2014 Galaxy Release (v 14.10)
    • August 2014 Galaxy Release (v 14.08)
    • June 2014 Galaxy Release (v 14.06)
    • April 2014 Galaxy Release (v 14.04)
    • February 2014 Galaxy Release (v 14.02)
    • November 2013 Galaxy Release (v 13.11)
    • August 2013 Galaxy Release (v 13.08)
    • June 2013 Galaxy Release (v 13.06)
    • April 2013 Galaxy Release (v 13.04)
    • February 2013 Galaxy Release (v 13.02)
    • January 2013 Galaxy Release (v 13.01)
    • Galaxy Releases older than v 13.01

Admin Documentation

  • Administration
    • Supported Python versions
    • Framework Dependencies
    • Galaxy Configuration
    • Logging Configuration
    • Production Environments
    • Security considerations
    • Proxying Galaxy with NGINX
    • Proxying Galaxy with Apache
    • Scaling and Load Balancing
    • Connecting to a Cluster
    • Galaxy Job Configuration
    • Authentication
    • Tool Panel Administration
    • Message queue
    • Dependency Resolvers in Galaxy
    • Conda for Tool Dependencies
    • Galaxy Database Schema Migrations
    • Galaxy Reports
    • Scripts & Tricks
    • Configuration Options
    • Migrating from uWSGI to Gunicorn and FastAPI
  • Special topics
    • Galaxy FTP Uploads
    • Galaxy InteractiveTools
    • Containers for Tool Dependencies
    • Galactic Radio Telescope
    • Galaxy Training Materials Webhook
    • Job Metrics
    • Galaxy Webhooks
    • Storing secrets in the vault
    • Galaxy Performance Tracking
    • Bug Reports
    • GDPR Compliance

Developer Documentation

  • Development
    • Galaxy Tool XML File
    • API Design Guidelines
    • Build a job runner
    • Finding and improving slow Galaxy code
    • Data managers
    • Data Types
    • How Do I…
    • Writing Tests for Galaxy
    • Debugging Galaxy Tests
    • Debugging tests that run out of memory
    • Debugging Galaxy
    • Debugging Galaxy: Slurm Compute Cluster
    • Translating the Interface
  • Galaxy API
    • Quickstart
    • Documentation
  • Tool Shed API
    • API Documentation
  • Application Documentation
    • galaxy package
    • galaxy_ext package
    • galaxy_test package
    • tool_shed package

About Project

  • Project Governance
    • Procedure Documents
    • Committers
    • Release branches
    • Handling Pull Requests
    • Issue Reporting
  • Issue Management
    • Issue Reporting
    • Milestones
    • Labeling Structure
    • The Roadmap
    • Voting
    • Automation
Galaxy Project
  • lib
  • galaxy package
  • galaxy.workflow package
  • galaxy.workflow.reports package
  • View page source

Warning

This document is for an in-development version of Galaxy. You can alternatively view this page in the latest release if it exists or view the top of the latest release's documentation.

galaxy.workflow.reports package¶

galaxy.workflow.reports.generate_report(trans, invocation, runtime_report_config_json=None, plugin_type=None, target_format='json')[source]¶

Subpackages¶

  • galaxy.workflow.reports.generators package
    • WorkflowReportGeneratorPlugin
      • WorkflowReportGeneratorPlugin.plugin_type
      • WorkflowReportGeneratorPlugin.generate_report_json()
      • WorkflowReportGeneratorPlugin.generate_report_pdf()
    • WorkflowMarkdownGeneratorPlugin
      • WorkflowMarkdownGeneratorPlugin.generate_report_json()
      • WorkflowMarkdownGeneratorPlugin.generate_report_pdf()
    • Submodules
    • galaxy.workflow.reports.generators.markdown module
      • MarkdownWorkflowMarkdownReportGeneratorPlugin
        • MarkdownWorkflowMarkdownReportGeneratorPlugin.plugin_type
Previous Next

© Copyright 2023, Galaxy Committers.

Built with Sphinx using a theme provided by Read the Docs.
Current Version v: dev
Versions
dev
stable
22.05
22.01
21.09
21.05
21.01
20.09
20.05
20.01
19.09
19.05
19.01
18.09
18.05
18.01
17.09
17.05