Galaxy Documentation

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

For more information on the Galaxy Project, please visit the

This site contains documentation for administrators and developers. For user documentation, and admin and developer tutorials, please visit the Galaxy Training Network.

The community also maintains a list of awesome Galaxy resources related to all aspects of Galaxy.

Release Notes

Indices and tables

Building this Documentation

If you have your own copy of the Galaxy source code, you can also generate your own version of this documentation. Run the following command from the Galaxy’s root:

$ make docs

The generated documentation will be in doc/build/html/ and can be viewed with a web browser. Note that you will need to install Sphinx and other module dependencies which are listed in the Makefile in the Galaxy root folder.