Warning
This document is for an old release of Galaxy. You can alternatively view this page in the latest release if it exists or view the top of the latest release's documentation.
Galaxy Documentation¶
Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.
For more information on the Galaxy Project, please visit the https://galaxyproject.org
- Releases
- January 2018 Galaxy Release (v 18.01)
- September 2017 Galaxy Release (v 17.09)
- May 2017 Galaxy Release (v 17.05)
- January 2017 Galaxy Release (v 17.01)
- October 2016 Galaxy Release (v 16.10)
- July 2016 Galaxy Release (v 16.07)
- April 2016 Galaxy Release (v 16.04)
- January 2016 Galaxy Release (v 16.01)
- October 2015 Galaxy Release (v 15.10)
- July 2015 Galaxy Release (v 15.07)
- May 2015 Galaxy Release (v 15.05)
- March 2015 Galaxy Release (v 15.03)
- January 2015 Galaxy Release (v 15.01)
- October 2014 Galaxy Release (v 14.10)
- August 2014 Galaxy Release (v 14.08)
- June 2014 Galaxy Release (v 14.06)
- April 2014 Galaxy Release (v 14.04)
- February 2014 Galaxy Release (v 14.02)
- November 2013 Galaxy Release (v 13.11)
- August 2013 Galaxy Release (v 13.08)
- June 2013 Galaxy Release (v 13.06)
- April 2013 Galaxy Release (v 13.04)
- February 2013 Galaxy Release (v 13.02)
- January 2013 Galaxy Release (v 13.01)
- Galaxy Releases older than v 13.01
- Administration
- Galaxy Configuration
- Logging Configuration
- Production Environments
- Scaling and Load Balancing
- Proxying Galaxy with NGINX
- Proxying Galaxy with Apache
- Connecting to a Cluster
- Galaxy Job Configuration
- Tool Panel Administration
- Authentication
- Dependency Resolvers in Galaxy
- Conda for Tool Dependencies
- Framework Dependencies
- Configuration Options
- Galaxy Reports
- Scripts & Tricks
- Special topics
Indices and tables¶
Building this Documentation¶
If you have your own copy of the Galaxy source code, you can also generate your own version of this documentation. Run the following command from the Galaxy’s root:
$ make docs
The generated documentation will be in doc/build/html/
and can be viewed with a web browser. Note that you will need to install Sphinx and a other module dependencies which are listed in the Makefile in the Galaxy root folder.