Warning
This document is for an old release of Galaxy. You can alternatively view this page in the latest release if it exists or view the top of the latest release's documentation.
tool_shed package¶
Subpackages¶
- tool_shed.capsule package
- tool_shed.dependencies package
- tool_shed.galaxy_install package
- Subpackages
- tool_shed.galaxy_install.datatypes package
- tool_shed.galaxy_install.grids package
- tool_shed.galaxy_install.metadata package
- tool_shed.galaxy_install.migrate package
- tool_shed.galaxy_install.repository_dependencies package
- tool_shed.galaxy_install.tool_dependencies package
- Subpackages
- tool_shed.galaxy_install.tool_dependencies.recipe package
- Submodules
- tool_shed.galaxy_install.tool_dependencies.recipe.asynchronous_reader module
- tool_shed.galaxy_install.tool_dependencies.recipe.env_file_builder module
- tool_shed.galaxy_install.tool_dependencies.recipe.install_environment module
- tool_shed.galaxy_install.tool_dependencies.recipe.recipe_manager module
- tool_shed.galaxy_install.tool_dependencies.recipe.step_handler module
- tool_shed.galaxy_install.tool_dependencies.recipe.tag_handler module
- tool_shed.galaxy_install.tool_dependencies.recipe package
- Submodules
- tool_shed.galaxy_install.tool_dependencies.env_manager module
- Subpackages
- tool_shed.galaxy_install.tools package
- tool_shed.galaxy_install.utility_containers package
- Submodules
- tool_shed.galaxy_install.dependency_display module
- tool_shed.galaxy_install.install_manager module
- tool_shed.galaxy_install.installed_repository_manager module
- tool_shed.galaxy_install.repair_repository_manager module
- tool_shed.galaxy_install.tool_migration_manager module
- tool_shed.galaxy_install.update_repository_manager module
- Subpackages
- tool_shed.grids package
- tool_shed.managers package
- tool_shed.metadata package
- tool_shed.repository_types package
- Submodules
- tool_shed.repository_types.metadata module
- tool_shed.repository_types.registry module
- tool_shed.repository_types.repository_suite_definition module
- tool_shed.repository_types.tool_dependency_definition module
- tool_shed.repository_types.unrestricted module
- tool_shed.repository_types.util module
- tool_shed.tools package
- tool_shed.util package
- Submodules
- tool_shed.util.basic_util module
- tool_shed.util.commit_util module
- tool_shed.util.common_util module
- tool_shed.util.container_util module
- tool_shed.util.encoding_util module
- tool_shed.util.hg_util module
- tool_shed.util.metadata_util module
- tool_shed.util.readme_util module
- tool_shed.util.repository_content_util module
- tool_shed.util.repository_util module
- tool_shed.util.review_util module
- tool_shed.util.search_util module
- tool_shed.util.shed_util_common module
- tool_shed.util.tool_dependency_util module
- tool_shed.util.tool_util module
- tool_shed.util.web_util module
- tool_shed.util.workflow_util module
- tool_shed.util.xml_util module
- tool_shed.utility_containers package
Submodules¶
tool_shed.repository_registry module¶
tool_shed.tool_shed_registry module¶
-
class
tool_shed.tool_shed_registry.
Registry
(config=None)[source]¶ Bases:
object
-
password_manager_for_url
(url)[source]¶ If the tool shed is using external auth, the client to the tool shed must authenticate to that as well. This provides access to the six.moves.urllib.request.HTTPPasswordMgrWithdefaultRealm() object for the url passed in.
Following more what galaxy.demo_sequencer.controllers.common does might be more appropriate at some stage…
-