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tool_shed package¶
Subpackages¶
- tool_shed.capsule package
- tool_shed.dependencies package
- tool_shed.galaxy_install package
- Subpackages
- tool_shed.galaxy_install.datatypes package
- tool_shed.galaxy_install.grids package
- tool_shed.galaxy_install.metadata package
- tool_shed.galaxy_install.migrate package
- Subpackages
- tool_shed.galaxy_install.migrate.versions package
- Submodules
- tool_shed.galaxy_install.migrate.versions.0001_tools module
- tool_shed.galaxy_install.migrate.versions.0002_tools module
- tool_shed.galaxy_install.migrate.versions.0003_tools module
- tool_shed.galaxy_install.migrate.versions.0004_tools module
- tool_shed.galaxy_install.migrate.versions.0005_tools module
- tool_shed.galaxy_install.migrate.versions.0006_tools module
- tool_shed.galaxy_install.migrate.versions.0007_tools module
- tool_shed.galaxy_install.migrate.versions.0008_tools module
- tool_shed.galaxy_install.migrate.versions.0009_tools module
- tool_shed.galaxy_install.migrate.versions.0010_tools module
- tool_shed.galaxy_install.migrate.versions.0011_tools module
- tool_shed.galaxy_install.migrate.versions.0012_tools module
- tool_shed.galaxy_install.migrate.versions package
- Submodules
- tool_shed.galaxy_install.migrate.check module
- tool_shed.galaxy_install.migrate.common module
- Subpackages
- tool_shed.galaxy_install.repository_dependencies package
- tool_shed.galaxy_install.tool_dependencies package
- Subpackages
- tool_shed.galaxy_install.tool_dependencies.recipe package
- Submodules
- tool_shed.galaxy_install.tool_dependencies.recipe.asynchronous_reader module
- tool_shed.galaxy_install.tool_dependencies.recipe.env_file_builder module
- tool_shed.galaxy_install.tool_dependencies.recipe.install_environment module
- tool_shed.galaxy_install.tool_dependencies.recipe.recipe_manager module
- tool_shed.galaxy_install.tool_dependencies.recipe.step_handler module
- tool_shed.galaxy_install.tool_dependencies.recipe.tag_handler module
- tool_shed.galaxy_install.tool_dependencies.recipe package
- Submodules
- tool_shed.galaxy_install.tool_dependencies.env_manager module
- Subpackages
- tool_shed.galaxy_install.tools package
- tool_shed.galaxy_install.utility_containers package
- Submodules
- tool_shed.galaxy_install.dependency_display module
- tool_shed.galaxy_install.install_manager module
- tool_shed.galaxy_install.installed_repository_manager module
- tool_shed.galaxy_install.repair_repository_manager module
- tool_shed.galaxy_install.tool_migration_manager module
- tool_shed.galaxy_install.update_repository_manager module
- Subpackages
- tool_shed.grids package
- tool_shed.managers package
- tool_shed.metadata package
- tool_shed.repository_types package
- Submodules
- tool_shed.repository_types.metadata module
- tool_shed.repository_types.registry module
- tool_shed.repository_types.repository_suite_definition module
- tool_shed.repository_types.tool_dependency_definition module
- tool_shed.repository_types.unrestricted module
- tool_shed.repository_types.util module
- tool_shed.tools package
- tool_shed.util package
- Submodules
- tool_shed.util.admin_util module
- tool_shed.util.basic_util module
- tool_shed.util.commit_util module
- tool_shed.util.common_util module
- tool_shed.util.container_util module
- tool_shed.util.encoding_util module
- tool_shed.util.hg_util module
- tool_shed.util.metadata_util module
- tool_shed.util.readme_util module
- tool_shed.util.repository_content_util module
- tool_shed.util.repository_util module
- tool_shed.util.review_util module
- tool_shed.util.search_util module
- tool_shed.util.shed_util_common module
- tool_shed.util.tool_dependency_util module
- tool_shed.util.tool_util module
- tool_shed.util.web_util module
- tool_shed.util.workflow_util module
- tool_shed.util.xml_util module
- tool_shed.utility_containers package
Submodules¶
tool_shed.repository_registry module¶
tool_shed.tool_shed_registry module¶
-
class
tool_shed.tool_shed_registry.
Registry
(config=None)[source]¶ Bases:
object
-
password_manager_for_url
(url)[source]¶ If the tool shed is using external auth, the client to the tool shed must authenticate to that as well. This provides access to the six.moves.urllib.request.HTTPPasswordMgrWithdefaultRealm() object for the url passed in.
Following more what galaxy.demo_sequencer.controllers.common does might be more appropriate at some stage…
-