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Source code for tool_shed.test.functional.test_1200_uninstall_and_reinstall_basic_repository

from ..base import common
from ..base.twilltestcase import ShedTwillTestCase


[docs]class TestUninstallingAndReinstallingRepositories(ShedTwillTestCase): """Test uninstalling and reinstalling a basic repository.""" requires_galaxy = True
[docs] def test_0000_initiate_users(self): """Create necessary user accounts.""" self.login(email=common.test_user_1_email, username=common.test_user_1_name) self.login(email=common.admin_email, username=common.admin_username)
[docs] def test_0005_ensure_repositories_and_categories_exist(self): """Create the 0000 category and upload the filtering repository to the tool shed, if necessary.""" category = self.create_category( name="Test 0000 Basic Repository Features 1", description="Test 0000 Basic Repository Features 1" ) self.create_category( name="Test 0000 Basic Repository Features 2", description="Test 0000 Basic Repository Features 2" ) self.login(email=common.test_user_1_email, username=common.test_user_1_name) repository = self.get_or_create_repository( name="filtering_0000", description="Galaxy's filtering tool for test 0000", long_description="Long description of Galaxy's filtering tool for test 0000", owner=common.test_user_1_name, category=category, ) if self.repository_is_new(repository): self.commit_tar_to_repository( repository, "filtering/filtering_1.1.0.tar", commit_message="Uploaded filtering 1.1.0 tarball.", ) self.add_file_to_repository(repository, "filtering/filtering_0000.txt") self.add_tar_to_repository(repository, "filtering/filtering_2.2.0.tar") self.add_file_to_repository(repository, "readme.txt")
[docs] def test_0010_install_filtering_repository(self): """Install the filtering repository into the Galaxy instance.""" self._install_repository( "filtering_0000", common.test_user_1_name, "Test 0000 Basic Repository Features 1", new_tool_panel_section_label="test_1000", ) self._assert_has_installed_repos_with_names("filtering_0000")
[docs] def test_0015_uninstall_filtering_repository(self): """Uninstall the filtering repository.""" installed_repository = self._get_installed_repository_by_name_owner("filtering_0000", common.test_user_1_name) self._uninstall_repository(installed_repository) self._assert_has_no_installed_repos_with_names("filtering_0000")
[docs] def test_0020_reinstall_filtering_repository(self): """Reinstall the filtering repository.""" installed_repository = self._get_installed_repository_by_name_owner("filtering_0000", common.test_user_1_name) self.reinstall_repository_api(installed_repository) self._assert_has_installed_repos_with_names("filtering_0000") self._assert_has_valid_tool_with_name("Filter1") self._assert_repo_has_tool_with_id(installed_repository, "Filter1")
[docs] def test_0025_deactivate_filtering_repository(self): """Deactivate the filtering repository without removing it from disk.""" installed_repository = self._get_installed_repository_by_name_owner("filtering_0000", common.test_user_1_name) self.deactivate_repository(installed_repository) self._assert_has_no_installed_repos_with_names("filtering_0000")
[docs] def test_0030_reactivate_filtering_repository(self): """Reactivate the filtering repository and verify that it now shows up in the list of installed repositories.""" installed_repository = self._get_installed_repository_by_name_owner("filtering_0000", common.test_user_1_name) self.reactivate_repository(installed_repository) self._assert_has_installed_repos_with_names("filtering_0000") self._assert_has_valid_tool_with_name("Filter1") self._assert_repo_has_tool_with_id(installed_repository, "Filter1")