Source code for tool_shed.repository_types.util

import logging

from galaxy.web.form_builder import SelectField

log = logging.getLogger(__name__)

REPOSITORY_DEPENDENCY_DEFINITION_FILENAME = 'repository_dependencies.xml'
REPOSITORY_SUITE_DEFINITION = 'repository_suite_definition'
TOOL_DEPENDENCY_DEFINITION = 'tool_dependency_definition'
TOOL_DEPENDENCY_DEFINITION_FILENAME = 'tool_dependencies.xml'
UNRESTRICTED = 'unrestricted'

types = [UNRESTRICTED, TOOL_DEPENDENCY_DEFINITION, REPOSITORY_SUITE_DEFINITION]


[docs]def build_repository_type_select_field(trans, repository=None, name='repository_type'): """Called from the Tool Shed to generate the current list of supported repository types.""" if repository: selected_type = str(repository.type) else: selected_type = None repository_type_select_field = SelectField(name=name) for type_label, type_class in trans.app.repository_types_registry.repository_types_by_label.items(): option_label = str(type_class.label) option_value = str(type_class.type) if selected_type and selected_type == option_value: selected = True else: selected = False if repository: if repository.type == option_value: repository_type_select_field.add_option(option_label, option_value, selected=selected) elif type_class.is_valid_for_type(trans.app, repository): repository_type_select_field.add_option(option_label, option_value, selected=selected) else: repository_type_select_field.add_option(option_label, option_value, selected=selected) return repository_type_select_field
[docs]def generate_message_for_repository_type_change(app, repository): message = '' if repository.can_change_type_to(app, REPOSITORY_SUITE_DEFINITION): repository_suite_definition_type_class = \ app.repository_types_registry.get_class_by_label(REPOSITORY_SUITE_DEFINITION) message += "This repository currently contains a single file named <b>%s</b>. If the intent of this repository is " % \ REPOSITORY_DEPENDENCY_DEFINITION_FILENAME message += "to define relationships to a collection of repositories that contain related Galaxy utilities with " message += "no plans to add additional files, consider setting its type to <b>%s</b>.<br/>" % \ repository_suite_definition_type_class.label elif repository.can_change_type_to(app, TOOL_DEPENDENCY_DEFINITION): tool_dependency_definition_type_class = \ app.repository_types_registry.get_class_by_label(TOOL_DEPENDENCY_DEFINITION) message += "This repository currently contains a single file named <b>%s</b>. If additional files will " % \ TOOL_DEPENDENCY_DEFINITION_FILENAME message += "not be added to this repository, consider setting its type to <b>%s</b>.<br/>" % \ tool_dependency_definition_type_class.label return message