Source code for galaxy_test.api.test_tool_data

"""Tests for the tool data API.

The tests for the DELETE endpoint can be found in the
integration tests directory (tests/integration/test_tool_data_delete.py)
since these tests can mutate the server config state.
"""

import operator

from ._framework import ApiTestCase


[docs]class ToolDataApiTestCase(ApiTestCase):
[docs] def test_admin_only(self): index_response = self._get("tool_data", admin=False) self._assert_status_code_is(index_response, 403)
[docs] def test_list(self): index_response = self._get("tool_data", admin=True) self._assert_status_code_is(index_response, 200) print(index_response.content) index = index_response.json() assert "testalpha" in [operator.itemgetter("name")(_) for _ in index]
[docs] def test_show(self): show_response = self._get("tool_data/testalpha", admin=True) self._assert_status_code_is(show_response, 200) print(show_response.content) data_table = show_response.json() assert data_table["columns"] == ["value", "name", "path"] first_entry = data_table["fields"][0] assert first_entry[0] == "data1" assert first_entry[1] == "data1name" assert first_entry[2].endswith("test/functional/tool-data/data1/entry.txt")
[docs] def test_show_field(self): show_field_response = self._get("tool_data/testalpha/fields/data1", admin=True) self._assert_status_code_is(show_field_response, 200) field = show_field_response.json() self._assert_has_keys(field, "files", "name", "fields", "fingerprint", "base_dir") files = field["files"] assert len(files) == 2, f"Length of files [{files}] was not 2."
[docs] def test_download_field_file(self): show_field_response = self._get("tool_data/testalpha/fields/data1/files/entry.txt", admin=True) self._assert_status_code_is(show_field_response, 200) content = show_field_response.text assert content == "This is data 1.", content
[docs] def test_reload(self): show_response = self._get("tool_data/test_fasta_indexes/reload", admin=True) self._assert_status_code_is(show_response, 200) print(show_response.content) data_table = show_response.json() assert data_table["columns"] == ["value", "dbkey", "name", "path"]
[docs] def test_show_unknown_raises_404(self): show_response = self._get("tool_data/unknown", admin=True) self._assert_status_code_is(show_response, 404)
[docs] def test_show_unknown_field_raises_404(self): show_response = self._get("tool_data/testalpha/fields/unknown", admin=True) self._assert_status_code_is(show_response, 404)
[docs] def test_reload_unknown_raises_404(self): show_response = self._get("tool_data/unknown/reload", admin=True) self._assert_status_code_is(show_response, 404)
[docs] def test_download_field_unknown_file_raises_404(self): show_field_response = self._get("tool_data/testalpha/fields/data1/files/unknown.txt", admin=True) self._assert_status_code_is(show_field_response, 404)
[docs] def test_delete_without_payload_raises_400(self): delete_response = self._delete("tool_data/testbeta", admin=True) self._assert_status_code_is(delete_response, 400)
[docs] def test_delete_without_values_raises_400(self): payload = {"unknown": "test"} delete_response = self._delete("tool_data/testbeta", data=payload, admin=True) self._assert_status_code_is(delete_response, 400)
[docs] def test_delete_with_wrong_values_raises_400(self): payload = {"values": "wrong"} delete_response = self._delete("tool_data/testbeta", data=payload, admin=True) self._assert_status_code_is(delete_response, 400)