Warning
This document is for an in-development version of Galaxy. You can alternatively view this page in the latest release if it exists or view the top of the latest release's documentation.
Source code for galaxy.jobs.runners.util.sudo
import logging
from subprocess import (
PIPE,
Popen,
)
SUDO_PATH = "/usr/bin/sudo"
SUDO_PRESERVE_ENVIRONMENT_ARG = "-E"
SUDO_USER_ARG = "-u"
log = logging.getLogger(__name__)
[docs]def sudo_popen(*args, **kwargs):
"""
Helper method for building and executing Popen command. This is potentially
sensetive code so should probably be centralized.
"""
full_command = [SUDO_PATH, SUDO_PRESERVE_ENVIRONMENT_ARG]
if user := kwargs.get("user", None):
full_command.extend([SUDO_USER_ARG, user])
full_command.extend(args)
log.info(f"About to execute the following sudo command - [{' '.join(full_command)}]")
p = Popen(full_command, shell=False, stdout=PIPE, stderr=PIPE)
return p