Warning

This document is for an old release of Galaxy. You can alternatively view this page in the latest release if it exists or view the top of the latest release's documentation.

Source code for galaxy.tool_util.verify.asserts.text

import re


[docs]def assert_has_text(output, text, n=None): """ Asserts specified output contains the substring specified by the argument text. The exact number of occurrences can be optionally specified by the argument n.""" if n is None: assert output.find(text) >= 0, f"Output file did not contain expected text '{text}' (output '{output}')" else: matches = re.findall(re.escape(text), output) assert len(matches) == int(n), "Expected {} matches for '{}' in output file (output '{}'); found {}".format(n, text, output, len(matches))
[docs]def assert_not_has_text(output, text): """ Asserts specified output does not contain the substring specified by the argument text.""" assert output.find(text) < 0, "Output file contains unexpected text '%s'" % text
[docs]def assert_has_line(output, line, n=None): """ Asserts the specified output contains the line specified by the argument line. The exact number of occurrences can be optionally specified by the argument n.""" if n is None: match = re.search("^%s$" % re.escape(line), output, flags=re.MULTILINE) assert match is not None, f"No line of output file was '{line}' (output was '{output}') " else: matches = re.findall("^%s$" % re.escape(line), output, flags=re.MULTILINE) assert len(matches) == int(n), "Expected {} lines matching '{}' in output file (output was '{}'); found {}".format(n, line, output, len(matches))
[docs]def assert_has_n_lines(output, n): """Asserts the specified output contains ``n`` lines.""" n_lines_found = len(output.splitlines()) assert n_lines_found == int(n), f"Expected {n} lines in output, found {n_lines_found} lines"
[docs]def assert_has_text_matching(output, expression): """ Asserts the specified output contains text matching the regular expression specified by the argument expression.""" match = re.search(expression, output) assert match is not None, "No text matching expression '%s' was found in output file." % expression
[docs]def assert_has_line_matching(output, expression): """ Asserts the specified output contains a line matching the regular expression specified by the argument expression.""" match = re.search("^%s$" % expression, output, flags=re.MULTILINE) assert match is not None, "No line matching expression '%s' was found in output file." % expression