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Source code for galaxy.tool_shed.galaxy_install.migrate.versions.0012_tools
"""
The following tools have been eliminated from the distribution:
1: Compute an expression on every row
2: Correlation for numeric columns
3: Count GFF Features
4: Filter on ambiguities in polymorphism datasets
5: Generate A Matrix for using PC and LDA
6: Histogram of a numeric column
7: Perform Linear Discriminant Analysis
8: Maximal Information-based Nonparametric Exploration
9: Pearson and apos Correlation between any two numeric columns
10: Convert from pgSnp to gd_snp
11: Draw ROC plot on "Perform LDA" output
12: Scatterplot of two numeric columns
13: snpFreq significant SNPs in case-control data
14: Build custom track for UCSC genome browser
15: VCF to pgSnp
The tools are now available in the repositories respectively:
1: column_maker
2: correlation
3: count_gff_features
4: dna_filtering
5: generate_pc_lda_matrix
6: histogram
7: lda_analysis
8: mine
9: pearson_correlation
10: pgsnp2gd_snp
11: plot_from_lda
12: scatterplot
13: snpfreq
14: ucsc_custom_track
15: vcf2pgsnp
from the main Galaxy tool shed at http://toolshed.g2.bx.psu.edu
and will be installed into your local Galaxy instance at the
location discussed above by running the following command.
"""