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Source code for galaxy.tool_shed.galaxy_install.migrate.versions.0012_tools
""" The following tools have been eliminated from the distribution: 1: Compute an expression on every row 2: Correlation for numeric columns 3: Count GFF Features 4: Filter on ambiguities in polymorphism datasets 5: Generate A Matrix for using PC and LDA 6: Histogram of a numeric column 7: Perform Linear Discriminant Analysis 8: Maximal Information-based Nonparametric Exploration 9: Pearson and apos Correlation between any two numeric columns 10: Convert from pgSnp to gd_snp 11: Draw ROC plot on "Perform LDA" output 12: Scatterplot of two numeric columns 13: snpFreq significant SNPs in case-control data 14: Build custom track for UCSC genome browser 15: VCF to pgSnp The tools are now available in the repositories respectively: 1: column_maker 2: correlation 3: count_gff_features 4: dna_filtering 5: generate_pc_lda_matrix 6: histogram 7: lda_analysis 8: mine 9: pearson_correlation 10: pgsnp2gd_snp 11: plot_from_lda 12: scatterplot 13: snpfreq 14: ucsc_custom_track 15: vcf2pgsnp from the main Galaxy tool shed at http://toolshed.g2.bx.psu.edu and will be installed into your local Galaxy instance at the location discussed above by running the following command. """[docs]def upgrade(migrate_engine): print(__doc__)[docs]def downgrade(migrate_engine): pass