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Source code for galaxy.webapps.galaxy.api.trs_search

"""Proxy requests to GA4GH TRS servers (e.g. Dockstore).

Information on TRS can be found at https://github.com/ga4gh/tool-registry-service-schemas.
"""

import logging

from galaxy.web import expose_api
from galaxy.workflow.trs_proxy import (
    parse_search_kwds,
    TrsProxy,
)
from . import (
    BaseGalaxyAPIController,
    depends,
)

log = logging.getLogger(__name__)


[docs]class TrsSearchAPIController(BaseGalaxyAPIController): """Controller for TRS searching. Not trying to emulate the actual underlying GA4GH API interface so throwing the search functionality into a different controller than the trs_consumer. """ _trs_proxy: TrsProxy = depends(TrsProxy)
[docs] @expose_api def index(self, trans, trs_server=None, query=None, **kwd): """ GET /api/trs_search Search a TRS server. :param query: search query :type query: str """ search_kwd = parse_search_kwds(query) rval = self._trs_proxy.get_server(trs_server).get_tools(**search_kwd) return rval