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Source code for galaxy.webapps.galaxy.api.roles

"""
API operations on Role objects.
"""
import json
import logging
from typing import List

from fastapi import (
    Body,
)
from pydantic import (
    BaseModel,
)

from galaxy import web
from galaxy.managers.base import decode_id
from galaxy.managers.context import ProvidesUserContext
from galaxy.managers.roles import (
    RoleDefinitionModel,
    RoleManager,
    RoleModel,
)
from galaxy.schema.fields import EncodedDatabaseIdField
from galaxy.webapps.base.controller import url_for
from . import (
    BaseGalaxyAPIController,
    depends,
    DependsOnTrans,
    Router,
)

log = logging.getLogger(__name__)


# Empty paths (e.g. /api/roles) only work if a prefix is defined right here.
# https://github.com/tiangolo/fastapi/pull/415/files
router = Router(tags=["roles"])


[docs]class RoleListModel(BaseModel): __root__: List[RoleModel]
[docs]def role_to_model(trans, role): item = role.to_dict(view='element', value_mapper={'id': trans.security.encode_id}) role_id = trans.security.encode_id(role.id) try: item['url'] = url_for('role', id=role_id) except AttributeError: item['url'] = "*deprecated attribute not filled in by FastAPI server*" return RoleModel(**item)
[docs]@router.cbv class FastAPIRoles: role_manager: RoleManager = depends(RoleManager)
[docs] @router.get('/api/roles') def index(self, trans: ProvidesUserContext = DependsOnTrans) -> RoleListModel: roles = self.role_manager.list_displayable_roles(trans) return RoleListModel(__root__=[role_to_model(trans, r) for r in roles])
[docs] @router.get('/api/roles/{id}') def show(self, id: EncodedDatabaseIdField, trans: ProvidesUserContext = DependsOnTrans) -> RoleModel: role_id = trans.app.security.decode_id(id) role = self.role_manager.get(trans, role_id) return role_to_model(trans, role)
[docs] @router.post("/api/roles", require_admin=True) def create(self, trans: ProvidesUserContext = DependsOnTrans, role_definition_model: RoleDefinitionModel = Body(...)) -> RoleModel: role = self.role_manager.create_role(trans, role_definition_model) return role_to_model(trans, role)
[docs]class RoleAPIController(BaseGalaxyAPIController): role_manager: RoleManager = depends(RoleManager)
[docs] @web.expose_api def index(self, trans: ProvidesUserContext, **kwd): """ GET /api/roles Displays a collection (list) of roles. """ roles = self.role_manager.list_displayable_roles(trans) return RoleListModel(__root__=[role_to_model(trans, r) for r in roles])
[docs] @web.expose_api def show(self, trans: ProvidesUserContext, id: str, **kwd): """ GET /api/roles/{encoded_role_id} Displays information about a role. """ role_id = decode_id(self.app, id) role = self.role_manager.get(trans, role_id) return role_to_model(trans, role)
[docs] @web.expose_api @web.require_admin def create(self, trans: ProvidesUserContext, payload, **kwd): """ POST /api/roles Creates a new role. """ expand_json_keys(payload, ["user_ids", "group_ids"]) role_definition_model = RoleDefinitionModel(**payload) role = self.role_manager.create_role(trans, role_definition_model) return role_to_model(trans, role)
[docs]def expand_json_keys(payload: dict, keys): for key in keys: value = payload.get(key) if isinstance(value, str): try: new_value = json.loads(value) payload[key] = new_value except Exception: pass