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Source code for galaxy.webapps.tool_shed.model.migrate.versions.0026_add_numeric_revision_column

"""Migration script to add the numeric_revision column to the repository metadata table."""
from __future__ import print_function

import logging
import sys

from sqlalchemy import Column, Integer, MetaData, Table

log = logging.getLogger(__name__)
handler = logging.StreamHandler(sys.stdout)
format = "%(name)s %(levelname)s %(asctime)s %(message)s"
formatter = logging.Formatter(format)

metadata = MetaData()

[docs]def upgrade(migrate_engine): print(__doc__) metadata.bind = migrate_engine metadata.reflect() RepositoryMetadata_table = Table("repository_metadata", metadata, autoload=True) c = Column("numeric_revision", Integer, index=True) try: # Create c.create(RepositoryMetadata_table, index_name="ix_numeric_revision") assert c is RepositoryMetadata_table.c.numeric_revision except Exception: log.exception("Adding numeric_revision column to the repository table failed.") # Update the numeric_revision column to have the default undefined value. cmd = "UPDATE repository_metadata SET numeric_revision = -1" migrate_engine.execute(cmd)
[docs]def downgrade(migrate_engine): metadata.bind = migrate_engine metadata.reflect() # Drop numeric_revision column from repository table. RepositoryMetadata_table = Table("repository_metadata", metadata, autoload=True) try: RepositoryMetadata_table.c.numeric_revision.drop() except Exception: log.exception("Dropping column numeric_revision from the repository table failed.")