galaxy.model.view package

Galaxy sql view models

class galaxy.model.view.HistoryDatasetCollectionJobStateSummary(**kwargs)

Bases: View

name = 'collection_job_state_summary_view'

aggregate_state_query = "\nSELECT\n    hdca_id,\n    SUM(CASE WHEN state = 'new' THEN 1 ELSE 0 END) AS new,\n    SUM(CASE WHEN state = 'resubmitted' THEN 1 ELSE 0 END) AS resubmitted,\n    SUM(CASE WHEN state = 'waiting' THEN 1 ELSE 0 END) AS waiting,\n    SUM(CASE WHEN state = 'queued' THEN 1 ELSE 0 END) AS queued,\n    SUM(CASE WHEN state = 'running' THEN 1 ELSE 0 END) AS running,\n    SUM(CASE WHEN state = 'ok' THEN 1 ELSE 0 END) AS ok,\n    SUM(CASE WHEN state = 'error' THEN 1 ELSE 0 END) AS error,\n    SUM(CASE WHEN state = 'failed' THEN 1 ELSE 0 END) AS failed,\n    SUM(CASE WHEN state = 'paused' THEN 1 ELSE 0 END) AS paused,\n    SUM(CASE WHEN state = 'deleted' THEN 1 ELSE 0 END) AS deleted,\n    SUM(CASE WHEN state = 'deleted_new' THEN 1 ELSE 0 END) AS deleted_new,\n    SUM(CASE WHEN state = 'upload' THEN 1 ELSE 0 END) AS upload,\n    SUM(CASE WHEN job_id IS NOT NULL THEN 1 ELSE 0 END) AS all_jobs\nFROM (\n    SELECT hdca.id AS hdca_id, job.id AS job_id, job.state as state\n    FROM history_dataset_collection_association hdca\n    LEFT JOIN implicit_collection_jobs icj\n        ON icj.id = hdca.implicit_collection_jobs_id\n    LEFT JOIN implicit_collection_jobs_job_association icjja\n        ON icj.id = icjja.implicit_collection_jobs_id\n    LEFT JOIN job\n        ON icjja.job_id = job.id\n\n    UNION\n\n    SELECT hdca.id AS hdca_id, job.id AS job_id, job.state AS state\n    FROM history_dataset_collection_association hdca\n    LEFT JOIN job\n        ON hdca.job_id = job.id\n) jobstates\nGROUP BY jobstates.hdca_id\n"

pkeys = {'hdca_id'}

__init__(**kwargs)

A simple constructor that allows initialization from kwargs.

Sets attributes on the constructed instance using the names and values in kwargs.

Only keys that are present as attributes of the instance’s class are allowed. These could be, for example, any mapped columns or relationships.

all_jobs

deleted

deleted_new

error

failed

hdca_id

new

ok

paused

queued

resubmitted

running

upload

waiting

Submodules

galaxy.model.view.utils module

View wrappers

class galaxy.model.view.utils.View

Bases: object

Base class for Views.

class galaxy.model.view.utils.CreateView(name, selectable)

Bases: DDLElement

__init__(name, selectable)

class galaxy.model.view.utils.DropView(name)

Bases: DDLElement

__init__(name)

galaxy.model.view.utils.compile_create_view(element, compiler, **kw)

galaxy.model.view.utils.compile_drop_view(element, compiler, **kw)

galaxy.model.view.utils.is_view_model(o)

galaxy.model.view.utils.install_views(engine)