Warning

This document is for an old release of Galaxy. You can alternatively view this page in the latest release if it exists or view the top of the latest release's documentation.

Source code for galaxy.model.view

"""
Galaxy sql view models
"""
from sqlalchemy import Integer
from sqlalchemy.orm import registry
from sqlalchemy.sql import (
    column,
    text,
)

from galaxy.model.view.utils import View


[docs]class HistoryDatasetCollectionJobStateSummary(View): name = "collection_job_state_summary_view" aggregate_state_query = """ SELECT hdca_id, SUM(CASE WHEN state = 'new' THEN 1 ELSE 0 END) AS new, SUM(CASE WHEN state = 'resubmitted' THEN 1 ELSE 0 END) AS resubmitted, SUM(CASE WHEN state = 'waiting' THEN 1 ELSE 0 END) AS waiting, SUM(CASE WHEN state = 'queued' THEN 1 ELSE 0 END) AS queued, SUM(CASE WHEN state = 'running' THEN 1 ELSE 0 END) AS running, SUM(CASE WHEN state = 'ok' THEN 1 ELSE 0 END) AS ok, SUM(CASE WHEN state = 'error' THEN 1 ELSE 0 END) AS error, SUM(CASE WHEN state = 'failed' THEN 1 ELSE 0 END) AS failed, SUM(CASE WHEN state = 'paused' THEN 1 ELSE 0 END) AS paused, SUM(CASE WHEN state = 'deleted' THEN 1 ELSE 0 END) AS deleted, SUM(CASE WHEN state = 'deleted_new' THEN 1 ELSE 0 END) AS deleted_new, SUM(CASE WHEN state = 'upload' THEN 1 ELSE 0 END) AS upload, SUM(CASE WHEN job_id IS NOT NULL THEN 1 ELSE 0 END) AS all_jobs FROM ( SELECT hdca.id AS hdca_id, job.id AS job_id, job.state as state FROM history_dataset_collection_association hdca LEFT JOIN implicit_collection_jobs icj ON icj.id = hdca.implicit_collection_jobs_id LEFT JOIN implicit_collection_jobs_job_association icjja ON icj.id = icjja.implicit_collection_jobs_id LEFT JOIN job ON icjja.job_id = job.id UNION SELECT hdca.id AS hdca_id, job.id AS job_id, job.state AS state FROM history_dataset_collection_association hdca LEFT JOIN job ON hdca.job_id = job.id ) jobstates GROUP BY jobstates.hdca_id """ __view__ = text(aggregate_state_query).columns( column("hdca_id", Integer), column("new", Integer), column("resubmitted", Integer), column("waiting", Integer), column("queued", Integer), column("running", Integer), column("ok", Integer), column("error", Integer), column("failed", Integer), column("paused", Integer), column("deleted", Integer), column("deleted_new", Integer), column("upload", Integer), column("all_jobs", Integer), ) pkeys = {"hdca_id"} __table__ = View._make_table(name, __view__, pkeys)
mapper_registry = registry() mapper_registry.map_imperatively( HistoryDatasetCollectionJobStateSummary, HistoryDatasetCollectionJobStateSummary.__table__ )