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Source code for tool_shed.webapp.model.migrate.versions.0010_add_new_repo_alert_column
"""
Migration script to add the new_repo_alert column to the galaxy_user table.
"""
import logging
import sys
from sqlalchemy import Boolean, Column, MetaData, Table
log = logging.getLogger(__name__)
log.setLevel(logging.DEBUG)
handler = logging.StreamHandler(sys.stdout)
format = "%(name)s %(levelname)s %(asctime)s %(message)s"
formatter = logging.Formatter(format)
handler.setFormatter(formatter)
log.addHandler(handler)
metadata = MetaData()
[docs]def upgrade(migrate_engine):
print(__doc__)
metadata.bind = migrate_engine
metadata.reflect()
# Create and initialize imported column in job table.
User_table = Table("galaxy_user", metadata, autoload=True)
c = Column("new_repo_alert", Boolean, default=False, index=True)
try:
# Create
c.create(User_table, index_name="ix_galaxy_user_new_repo_alert")
assert c is User_table.c.new_repo_alert
# Initialize.
if migrate_engine.name == 'mysql' or migrate_engine.name == 'sqlite':
default_false = "0"
elif migrate_engine.name in ['postgresql', 'postgres']:
default_false = "false"
else:
log.debug("unknown migrate_engine dialect")
migrate_engine.execute("UPDATE galaxy_user SET new_repo_alert=%s" % default_false)
except Exception:
log.exception("Adding new_repo_alert column to the galaxy_user table failed.")
[docs]def downgrade(migrate_engine):
metadata.bind = migrate_engine
metadata.reflect()
# Drop new_repo_alert column from galaxy_user table.
User_table = Table("galaxy_user", metadata, autoload=True)
try:
User_table.c.new_repo_alert.drop()
except Exception:
log.exception("Dropping column new_repo_alert from the galaxy_user table failed.")