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Source code for galaxy.webapps.tool_shed.util.hgweb_config
import logging
import os
import shutil
import threading
from datetime import date
from six.moves import configparser
from galaxy.util import unicodify
log = logging.getLogger(__name__)
new_hgweb_config_template = """
[paths]
"""
[docs]class HgWebConfigManager(object):
[docs] def add_entry(self, lhs, rhs):
"""Add an entry in the hgweb.config file for a new repository."""
lock = threading.Lock()
lock.acquire(True)
try:
# Since we're changing the config, make sure the latest is loaded into memory.
self.read_config(force_read=True)
# An entry looks something like: repos/test/mira_assembler = database/community_files/000/repo_123.
if rhs.startswith('./'):
rhs = rhs.replace('./', '', 1)
self.make_backup()
# Add the new entry into memory.
self.in_memory_config.set('paths', lhs, rhs)
# Persist our in-memory configuration.
self.write_config()
except Exception as e:
log.debug("Exception in HgWebConfigManager.add_entry(): %s", unicodify(e))
finally:
lock.release()
[docs] def change_entry(self, old_lhs, new_lhs, new_rhs):
"""Change an entry in the hgweb.config file for a repository - this only happens when the owner changes the name of the repository."""
lock = threading.Lock()
lock.acquire(True)
try:
self.make_backup()
# Remove the old entry.
self.in_memory_config.remove_option('paths', old_lhs)
# Add the new entry.
self.in_memory_config.set('paths', new_lhs, new_rhs)
# Persist our in-memory configuration.
self.write_config()
except Exception as e:
log.debug("Exception in HgWebConfigManager.change_entry(): %s", unicodify(e))
finally:
lock.release()
[docs] def get_entry(self, lhs):
"""Return an entry in the hgweb.config file for a repository"""
self.read_config()
try:
entry = self.in_memory_config.get('paths', lhs)
except configparser.NoOptionError:
try:
# We have a multi-threaded front-end, so one of the threads may not have the latest version of the hgweb.config file.
self.read_config(force_read=True)
entry = self.in_memory_config.get('paths', lhs)
except configparser.NoOptionError:
raise Exception("Entry for repository %s missing in file %s." % (lhs, self.hgweb_config))
return entry
@property
def hgweb_config(self):
hgweb_config = os.path.join(self.hgweb_config_dir, 'hgweb.config')
if not os.path.exists(hgweb_config):
# We used to raise an exception here...
# raise Exception( "Required file %s does not exist - check config setting for hgweb_config_dir." % hgweb_config )
# ...but now we just log the missing file and create a new empty one.
log.debug("Required file %s does not exist, so creating a new, empty file. Check your config setting for hgweb_config_dir." % hgweb_config)
hgweb_config_file = open(hgweb_config, 'wb')
hgweb_config_file.write(new_hgweb_config_template)
hgweb_config_file.close()
return os.path.abspath(hgweb_config)
[docs] def make_backup(self):
# Make a backup of the hgweb.config file.
today = date.today()
backup_date = today.strftime("%Y_%m_%d")
hgweb_config_backup_filename = 'hgweb.config_%s_backup' % backup_date
hgweb_config_copy = os.path.join(self.hgweb_config_dir, hgweb_config_backup_filename)
shutil.copy(os.path.abspath(self.hgweb_config), os.path.abspath(hgweb_config_copy))
[docs] def read_config(self, force_read=False):
if force_read or self.in_memory_config is None:
config = configparser.ConfigParser()
config.read(self.hgweb_config)
self.in_memory_config = config
[docs] def write_config(self):
"""Writing the in-memory configuration to the hgweb.config file on disk."""
config_file = open(self.hgweb_config, 'wb')
self.in_memory_config.write(config_file)
config_file.close