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galaxy_test.selenium package

Subpackages

• galaxy_test.selenium.jupyter package
  • Example Notebooks
  • Developing Galaxy Test Cases Interactively with Jupyter
    • The Setup
    • Filling out Tests

Submodules

galaxy_test.selenium.conftest module

galaxy_test.selenium.conftest.get_timings(test_uuid)

galaxy_test.selenium.conftest.pytest_configure(config)

class galaxy_test.selenium.conftest.JsonReportHooks

Bases: object

pytest_json_runtest_metadata(item, call)

pytest_json_modifyreport(json_report)

galaxy_test.selenium.framework module

Basis for Selenium test framework.

galaxy_test.selenium.framework.managed_history(f)

Ensure a Selenium test has a distinct, named history.

Cleanup the history after the job is complete as well unless GALAXY_TEST_NO_CLEANUP is set in the environment.

galaxy_test.selenium.framework.dump_test_information(self, name_prefix)

galaxy_test.selenium.framework.selenium_test(f)

class galaxy_test.selenium.framework.TestSnapshot(driver, index, description)

Bases: object

__init__(driver, index, description)

write_to_error_directory(write_file_func)

class galaxy_test.selenium.framework.GalaxyTestSeleniumContext

Bases: galaxy.selenium.context.GalaxySeleniumContext

Extend GalaxySeleniumContext with Selenium-aware galaxy_test.base.populators.

property dataset_populator: galaxy_test.base.populators.BaseDatasetPopulator

A dataset populator connected to the Galaxy session described by Selenium context.

property dataset_collection_populator: galaxy_test.base.populators.BaseDatasetCollectionPopulator

A dataset collection populator connected to the Galaxy session described by Selenium context.

property workflow_populator: galaxy_test.base.populators.BaseWorkflowPopulator

A workflow populator connected to the Galaxy session described by Selenium context.

url: str

target_url_from_selenium: str

timeout_multiplier: float

class galaxy_test.selenium.framework.TestWithSeleniumMixin

Bases: galaxy_test.selenium.framework.GalaxyTestSeleniumContext, galaxy_test.base.api.UsesApiTestCaseMixin

framework_tool_and_types = True

ensure_registered = False

ensure_beta_history = False

requires_admin = False

setup_selenium()

setup_with_driver()

Override point that allows setting up data using self.driver and Selenium connection.

Overriding this instead of setUp will ensure debug data such as screenshots and stack traces are dumped if there are problems with the setup and it will be re-ran on test retries.

tear_down_selenium()

snapshot(description)

Create a debug snapshot (DOM, screenshot, etc…) that is written out on tool failure.

This information will be automatically written to a per-test directory created for all failed tests.

get_download_path()

Returns default download path

api_interactor_for_logged_in_user()

write_screenshot_directory_file(label, content)

reset_driver_and_session()

setup_driver_and_session()

login()

tear_down_driver()

default_web_host = '127.0.0.1'

property timeout_multiplier

assert_initial_history_panel_state_correct()

admin_login()

assert_workflow_has_changes_and_save()

assert_modal_has_text(expected_text)

workflow_upload_yaml_with_random_name(content, **kwds)

ensure_visualization_available(hid, visualization_name)

Skip or fail a test if visualization for file doesn’t appear.

Precondition: viz menu has been opened with history_panel_item_click_visualization_menu.

url: str

target_url_from_selenium: str

class galaxy_test.selenium.framework.SeleniumTestCase(methodName='runTest')

Bases: galaxy_test.base.testcase.FunctionalTestCase, galaxy_test.selenium.framework.TestWithSeleniumMixin

galaxy_driver_class

alias of galaxy_test.driver.driver_util.GalaxyTestDriver

setUp()

Hook method for setting up the test fixture before exercising it.

tearDown()

Hook method for deconstructing the test fixture after testing it.

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

class galaxy_test.selenium.framework.SharedStateSeleniumTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

This describes a class Selenium tests that setup class state for all tests.

This is a bit hacky because we are simulating class level initialization with instance level methods. The problem is that super.setUp() works at instance level. It might be worth considering having two variants of SeleniumTestCase - one that initializes with the class and the other that initializes with the instance but all the helpers are instance helpers.

shared_state_initialized = False

shared_state_in_error = False

setup_with_driver()

Override point that allows setting up data using self.driver and Selenium connection.

Overriding this instead of setUp will ensure debug data such as screenshots and stack traces are dumped if there are problems with the setup and it will be re-ran on test retries.

setup_shared_state()

Override this to setup shared data for tests that gets initialized only once.

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

class galaxy_test.selenium.framework.UsesLibraryAssertions

Bases: object

assert_num_displayed_items_is(n)

num_displayed_items() → int

class galaxy_test.selenium.framework.UsesHistoryItemAssertions

Bases: object

assert_item_peek_includes(hid, expected)

assert_item_info_includes(hid, expected)

assert_item_dbkey_displayed_as(hid, dbkey)

assert_item_summary_includes(hid, expected_text)

assert_item_name(hid, expected_name)

assert_item_hid_text(hid)

galaxy_test.selenium.framework.default_web_host_for_selenium_tests()

galaxy_test.selenium.framework.get_configured_driver()

galaxy_test.selenium.framework.headless_selenium()

galaxy_test.selenium.framework.use_virtual_display()

class galaxy_test.selenium.framework.SeleniumSessionGetPostMixin

Bases: object

Mixin for adapting Galaxy testing populators helpers to Selenium session backed bioblend.

selenium_context: galaxy.selenium.context.GalaxySeleniumContext

class galaxy_test.selenium.framework.SeleniumSessionDatasetPopulator(selenium_context: galaxy.selenium.context.GalaxySeleniumContext)

Bases: galaxy_test.selenium.framework.SeleniumSessionGetPostMixin, galaxy_test.base.populators.BaseDatasetPopulator

Implementation of BaseDatasetPopulator backed by bioblend.

__init__(selenium_context: galaxy.selenium.context.GalaxySeleniumContext)

Construct a dataset populator from a bioblend GalaxyInstance.

selenium_context: galaxy.selenium.context.GalaxySeleniumContext

class galaxy_test.selenium.framework.SeleniumSessionDatasetCollectionPopulator(selenium_context: galaxy.selenium.context.GalaxySeleniumContext)

Bases: galaxy_test.selenium.framework.SeleniumSessionGetPostMixin, galaxy_test.base.populators.BaseDatasetCollectionPopulator

Implementation of BaseDatasetCollectionPopulator backed by bioblend.

__init__(selenium_context: galaxy.selenium.context.GalaxySeleniumContext)

Construct a dataset collection populator from a bioblend GalaxyInstance.

selenium_context: galaxy.selenium.context.GalaxySeleniumContext

class galaxy_test.selenium.framework.SeleniumSessionWorkflowPopulator(selenium_context: galaxy.selenium.context.GalaxySeleniumContext)

Bases: galaxy_test.selenium.framework.SeleniumSessionGetPostMixin, galaxy_test.base.populators.BaseWorkflowPopulator, gxformat2.interface.ImporterGalaxyInterface

Implementation of BaseWorkflowPopulator backed by bioblend.

__init__(selenium_context: galaxy.selenium.context.GalaxySeleniumContext)

Construct a workflow populator from a bioblend GalaxyInstance.

selenium_context: galaxy.selenium.context.GalaxySeleniumContext

import_workflow(workflow: dict, **kwds) → dict

Import a workflow via POST /api/workflows or comparable interface into Galaxy.

upload_yaml_workflow(has_yaml, **kwds) → str

galaxy_test.selenium.jupyter_context module

Variant of JuypterContextImpl that can also use populators.

This provides an environment separate from test cases that can leaverage both Selenium for testing Galaxy with a browser and API populators for filling in fixture data rapidly in the target Galaxy.

class galaxy_test.selenium.jupyter_context.JupyterTestContextImpl(from_dict: Optional[dict] = None)

Bases: galaxy.selenium.jupyter_context.JupyterContextImpl, galaxy_test.selenium.framework.GalaxyTestSeleniumContext

__init__(from_dict: Optional[dict] = None) → None

test_login()

url: str

target_url_from_selenium: str

timeout_multiplier: float

galaxy_test.selenium.jupyter_context.init(config=None)

galaxy_test.selenium.test_admin_app module

class galaxy_test.selenium.test_admin_app.AdminAppTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

requires_admin = True

test_html_allowlist()

test_admin_toolshed()

This tests installing a repository, checking for upgrades, and uninstalling.

A repository named a_selenium_test_repo has been created for this test, owned by devteam@galaxyproject.org. The repository contains a tool with two versions, and the oldest version gets installed so that there will be an upgrade available on the ‘Installed Only’ view. Unfortunately, since this test relies on the presence of the toolshed server, in some cases it will fail even if the galaxy code is correct, necessitating the use of the @flakey decorator.

test_admin_dependencies_display()

test_admin_jobs_display()

test_admin_server_display()

test_admin_user_display()

test_admin_data_manager()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_anon_history module

class galaxy_test.selenium.test_anon_history.AnonymousHistoriesTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

test_anon_history_landing()

test_anon_history_upload()

test_anon_history_after_registration()

test_clean_anon_history_after_logout()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_change_password module

class galaxy_test.selenium.test_change_password.ChangePasswordTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

test_change_password()

test_new_password_password()

test_no_password_confirmation()

test_currect_password_incorrect()

test_new_password_short()

test_new_password_same_password()

register_and_change_password()

fill_input_fields(current, password, confirm)

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_collection_builders module

class galaxy_test.selenium.test_collection_builders.CollectionBuildersTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_build_list_simple_hidden()

test_build_list_and_show_items()

test_build_pair_simple_hidden()

test_build_paired_list_simple()

test_build_paired_list_show_original()

test_build_simple_list_via_rules_hidden()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_collection_edit module

class galaxy_test.selenium.test_collection_edit.CollectionEditTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_change_dbkey_simple_list()

create_simple_list_collection()

open_collection_edit_view()

navigate_to_database_tab()

check_current_dbkey_value(dbkeyValue)

change_dbkey_value_and_click_submit(dbkeyValue, dbkeyNew)

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_custom_builds module

class galaxy_test.selenium.test_custom_builds.CustomBuildsTestcase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SharedStateSeleniumTestCase

test_build_add()

test_build_delete()

assert_custom_builds_in_grid(expected_builds, present=True)

add_custom_build(build_name, build_key)

delete_custom_build(build_name)

get_custom_builds()

navigate_to_custom_builds_page()

setup_shared_state()

Override this to setup shared data for tests that gets initialized only once.

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_data_source_tools module

class galaxy_test.selenium.test_data_source_tools.DataSourceTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase, galaxy_test.selenium.framework.UsesHistoryItemAssertions

ensure_registered = True

test_ucsc_table_direct1_data_source()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_histories_list module

class galaxy_test.selenium.test_histories_list.SavedHistoriesTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SharedStateSeleniumTestCase

test_histories_list()

test_history_switch()

test_history_view()

test_history_publish()

test_rename_history()

test_delete_and_undelete_history()

test_permanently_delete_history()

test_delete_and_undelete_multiple_histories()

test_sort_by_name()

test_standard_search()

test_advanced_search()

test_tags()

assert_grid_histories_are(expected_histories, sort_matters=True)

assert_histories_in_grid(expected_histories, present=True)

get_histories()

set_filter(selector, value)

unset_filter(filter_key, filter_value)

setup_shared_state()

Override this to setup shared data for tests that gets initialized only once.

create_history(name)

select_filter(filter_key, filter_value)

get_history_tags_cell(history_name)

check_histories(histories)

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_history_copy_elements module

class galaxy_test.selenium.test_history_copy_elements.HistoryCopyElementsTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_copy_hdca()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_history_dataset_state module

class galaxy_test.selenium.test_history_dataset_state.HistoryDatasetStateTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase, galaxy_test.selenium.framework.UsesHistoryItemAssertions

ensure_registered = True

test_dataset_state()

test_dataset_change_dbkey()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_history_export module

class galaxy_test.selenium.test_history_export.HistoryExportTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_history_export()

select_export_to_file()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_history_multi_view module

class galaxy_test.selenium.test_history_multi_view.HistoryMultiViewTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_create_new_old_slides_next()

test_list_list_display()

test_list_list_list_display()

test_copy_history()

test_delete_history()

test_purge_history()

test_switch_history()

1. Load the multi history view. There should be a selector for the button to create a new history.

2. Create a new history. This should automatically switch to the newly created history.

3. Switch back to the original history. A button should appear on the old, previously created history that allows switching back to that one, and the history ID should now match the ID of the history with which we started.

assert_history(history_id, histories_number=1, should_exist=True)

copy_history(history_id)

prepare_multi_history_view(collection_populator_method)

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_history_options module

class galaxy_test.selenium.test_history_options.HistoryOptionsTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

test_options()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_history_panel module

class galaxy_test.selenium.test_history_panel.HistoryPanelTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_history_panel_landing_state()

test_history_panel_rename()

test_history_rename_confirm_with_click()

test_history_rename_cancel_with_escape()

test_history_tags_and_annotations_buttons()

test_history_panel_annotations_change()

test_history_panel_tags_change()

open_tags()

clear_tags(expected_tags_size)

test_refresh_preserves_state()

assert_name_changed()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_history_panel_collections module

class galaxy_test.selenium.test_history_panel_collections.HistoryPanelCollectionsTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_mapping_collection_states_terminal()

test_mapping_collection_states_running()

test_output_collection_states_terminal()

test_output_collection_states_running()

test_back_to_history_button()

test_rename_collection()

test_name_tags_display()

test_paired_display()

test_list_display()

test_list_paired_display()

test_list_list_display()

test_limiting_collection_rendering()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_history_panel_pagination module

class galaxy_test.selenium.test_history_panel_pagination.HistoryPanelPaginationTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_pagination()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_history_sharing module

class galaxy_test.selenium.test_history_sharing.HistorySharingTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

test_sharing_valid()

test_sharing_valid_by_id()

test_unsharing()

test_unshared_history_inaccessible()

test_sharing_with_invalid_user()

test_sharing_with_self()

setup_two_users_with_one_shared_history(share_by_id=False)

navigate_to_history_share_page()

share_history_with_user(user_id=None, user_email=None, assert_valid=False, screenshot=False)

Share the current history with a target user by ID or email.

user_email will be used to enter in the share form unless user_id is also specified. The user_email however is always used to check the result if assert_valid is True.

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_history_structure module

class galaxy_test.selenium.test_history_structure.HistoryStructureTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_history_structure()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_jupyter module

class galaxy_test.selenium.test_jupyter.JupyterTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_jupyter_launch()

test_jupyter_interaction()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_library_contents module

class galaxy_test.selenium.test_library_contents.LibraryContentsTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase, galaxy_test.selenium.framework.UsesLibraryAssertions

requires_admin = True

test_sub_folder()

test_import_dataset_from_history()

download_dataset_from_library()

test_delete_dataset()

test_import_dataset_from_path()

test_import_dataset_from_import_dir()

test_show_details()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_library_landing module

class galaxy_test.selenium.test_library_landing.LibraryLandingTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

requires_admin = True

setup_with_driver()

Override point that allows setting up data using self.driver and Selenium connection.

Overriding this instead of setUp will ensure debug data such as screenshots and stack traces are dumped if there are problems with the setup and it will be re-ran on test retries.

test_create_new_close()

test_create_new()

test_rename()

test_sorting()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_library_to_collections module

class galaxy_test.selenium.test_library_to_collections.LibraryToCollectionsTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase, galaxy_test.selenium.framework.UsesLibraryAssertions

requires_admin = True

test_library_collection_export_new_history()

test_library_collection_export()

test_library_pair_export_new_history()

test_library_pair_export()

test_export_pairs_list_new_history()

test_export_pairs_list()

prepare_library_for_data_export(files_to_import, history_name=None)

build_collection_and_assert()

collection_export(is_new_history=False, collection_option=None)

list_of_pairs_export(is_new_history=False)

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_login module

class galaxy_test.selenium.test_login.LoginTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

test_logging_in()

test_invalid_logins()

test_invalid_passwords()

test_wrong_password()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_navigates_galaxy module

class galaxy_test.selenium.test_navigates_galaxy.NavigatesGalaxySeleniumTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

Test the Selenium test framework itself.

Unlike the others test cases in this module, this test case tests the test framework itself (for when that makes sense, mostly corner cases).

test_click_error()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_pages module

class galaxy_test.selenium.test_pages.PagesTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_simple_page_creation_edit_and_view()

navigate_to_pages()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_personal_information module

class galaxy_test.selenium.test_personal_information.ManageInformationTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

test_api_key()

This test views and resets the API key. In automated testing scenarios, this means the initial API key will be None, which renders as ‘Not available.’

test_change_email()

test_public_name()

test_user_address()

navigate_to_manage_information()

clear_input_field_and_write(element, new_input_text)

get_address_input_field(address_form, input_field_label)

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

class galaxy_test.selenium.test_personal_information.DeleteCurrentAccountTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

test_delete_account()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_published_histories_grid module

class galaxy_test.selenium.test_published_histories_grid.HistoryGridTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SharedStateSeleniumTestCase

test_history_grid_histories()

test_history_grid_search_standard()

test_history_grid_search_advanced()

test_history_grid_sort_by_name()

test_history_grid_sort_by_owner()

test_history_grid_tag_click()

get_histories(sleep=False)

assert_grid_histories_sorted_by_owner()

assert_grid_histories_are(expected_histories, sort_matters=True)

assert_histories_in_grid(expected_histories, present=True)

set_filter(selector, value)

unset_filter(filter_key, filter_value)

setup_shared_state()

Override this to setup shared data for tests that gets initialized only once.

create_history(name)

publish_current_history()

navigate_to_published_histories_page()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_registration module

class galaxy_test.selenium.test_registration.RegistrationTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

test_landing()

test_registration()

test_logout()

test_reregister_email_fails()

test_reregister_username_fails()

test_bad_emails()

test_short_password()

test_password_confirmation()

test_bad_usernames()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_sign_out module

class galaxy_test.selenium.test_sign_out.SignOutTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

test_sign_out()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_sizzle_loading module

class galaxy_test.selenium.test_sizzle_loading.SizzleLoadingTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

test_sizzle_loads()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_stock_tours module

class galaxy_test.selenium.test_stock_tours.TestStockToursTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

test_core_galaxy_ui()

test_core_scratchbook()

test_core_history()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_tool_describing_tours module

class galaxy_test.selenium.test_tool_describing_tours.ToolDescribingToursTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

setUp()

Hook method for setting up the test fixture before exercising it.

test_generate_tour_no_data()

Ensure a tour without data is generated and pops up.

test_generate_tour_with_data()

Ensure a tour with data populates history.

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_tool_form module

class galaxy_test.selenium.test_tool_form.ToolFormTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase, galaxy_test.selenium.framework.UsesHistoryItemAssertions

test_run_tool_verify_contents_by_peek()

test_run_tool_verify_dataset_details()

test_verify_dataset_details_tables()

static click_menu_item(menu, text)

test_rerun()

test_run_data()

test_bibtex_rendering()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

class galaxy_test.selenium.test_tool_form.LoggedInToolFormTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_run_apply_rules_1()

test_run_apply_rules_2()

test_run_apply_rules_3()

test_run_apply_rules_4()

test_run_apply_rules_tutorial()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_uploads module

class galaxy_test.selenium.test_uploads.UploadsTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase, galaxy_test.selenium.framework.UsesHistoryItemAssertions

test_upload_simplest()

test_upload_specify_ext()

test_upload_specify_genome()

test_upload_specify_ext_all()

test_upload_specify_genome_all()

test_upload_list()

test_upload_pair()

test_upload_pair_specify_extension()

test_upload_paired_list()

test_rules_example_1_datasets()

test_rules_example_2_list()

test_rules_example_3_list_pairs()

test_rules_example_4_accessions()

test_rules_example_5_matching_collections()

test_rules_example_6_nested_lists()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_workflow_editor module

class galaxy_test.selenium.test_workflow_editor.WorkflowEditorTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_basics()

test_edit_annotation()

test_edit_name()

test_optional_select_data_field()

test_data_input()

test_collection_input()

test_data_column_input_editing()

test_integer_input()

test_non_data_connections()

test_non_data_map_over_carried_through()

test_connecting_display_in_upload_false_connections()

test_existing_connections()

test_reconnecting_nodes()

test_rendering_output_collection_connections()

test_simple_mapping_connections()

test_rendering_simple_nested_workflow()

test_rendering_rules_workflow_1()

test_rendering_rules_workflow_2()

test_save_as()

test_editor_tool_upgrade()

test_editor_tool_upgrade_message()

test_editor_subworkflow_tool_upgrade_message()

static set_text_element(element, value)

test_editor_duplicate_node()

test_editor_embed_workflow()

test_editor_invalid_tool_state()

test_missing_tools()

test_workflow_bookmarking()

workflow_editor_maximize_center_pane(collapse_left=True, collapse_right=True)

workflow_editor_connect(source, sink, screenshot_partial=None)

assert_connected(source, sink)

assert_not_connected(source, sink)

open_in_workflow_editor(yaml_content, auto_layout=True)

workflow_editor_source_sink_terminal_ids(source, sink)

workflow_editor_add_input(item_name='data_input')

workflow_editor_destroy_connection(sink)

assert_input_mapped(sink)

assert_input_not_mapped(sink)

workflow_index_open_with_name(name)

workflow_upload_yaml_with_random_name(content)

assert_wf_name_is(expected_name)

assert_wf_annotation_is(expected_annotation)

assert_modal_has_text(expected_text)

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_workflow_invocation_details module

class galaxy_test.selenium.test_workflow_invocation_details.WorkflowInvocationDetailsTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_job_details()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_workflow_management module

class galaxy_test.selenium.test_workflow_management.WorkflowManagementTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_import_from_url()

test_view()

test_rename()

test_download()

test_tagging()

test_index_search()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_workflow_run module

class galaxy_test.selenium.test_workflow_run.WorkflowRunTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase, galaxy_test.selenium.framework.UsesHistoryItemAssertions

ensure_registered = True

test_simple_execution()

test_runtime_parameters_simple()

test_subworkflows_simple()

test_subworkflow_runtime_parameters()

test_replacement_parameters()

test_step_parameter_inputs()

test_replacement_parameters_on_subworkflows()

test_execution_with_tool_upgrade()

test_execution_with_multiple_inputs()

test_execution_with_text_default_value_connected_to_restricted_select()

test_execution_with_rules()

test_execution_with_custom_invocation_report()

test_execution_with_null_optional_select_from_data()

open_in_workflow_run(yaml_content)

workflow_run_setup_inputs(content)

workflow_run_specify_inputs(inputs)

workflow_run_with_name(name)

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str

galaxy_test.selenium.test_workflow_sharing module

class galaxy_test.selenium.test_workflow_sharing.WorkflowSharingTestCase(methodName='runTest')

Bases: galaxy_test.selenium.framework.SeleniumTestCase

ensure_registered = True

test_share_workflow_with_login_redirect()

history_id: Optional[str]

host: str

port: Optional[str]

url: str

keepOutdir: str

test_data_resolver: galaxy.tool_util.verify.test_data.TestDataResolver

target_url_from_selenium: str