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galaxy.tools.error_reports.plugins package

This module describes the abstract interface for InstrumentPlugin.

These are responsible for collecting and formatting a coherent set of metrics.

class galaxy.tools.error_reports.plugins.ErrorPlugin

Bases: object

Describes how to send bug reports to various locations.

plugin_type

Short string providing labelling this plugin

submit_report(dataset, job, tool, user_submission=False, **kwargs)

Submit the bug report and render a string to be displayed to the user.

Submodules

galaxy.tools.error_reports.plugins.biostars module

The module describes the biostars error plugin.

class galaxy.tools.error_reports.plugins.biostars.BiostarsPlugin(**kwargs)

Bases: galaxy.tools.error_reports.plugins.ErrorPlugin

Send error report as an issue on Biostars

plugin_type = 'biostars'

__init__(**kwargs)

submit_report(dataset, job, tool, **kwargs)

Doesn’t do anything, just shows a link to submit on biostars.

galaxy.tools.error_reports.plugins.email module

The module describes the email error plugin.

class galaxy.tools.error_reports.plugins.email.EmailPlugin(**kwargs)

Bases: galaxy.tools.error_reports.plugins.ErrorPlugin

Send error report as an email

plugin_type = 'email'

__init__(**kwargs)

submit_report(dataset, job, tool, **kwargs)

Send report as an email

galaxy.tools.error_reports.plugins.github module

The module describes the github error plugin plugin.

class galaxy.tools.error_reports.plugins.github.GithubPlugin(**kwargs)

Bases: galaxy.tools.error_reports.plugins.ErrorPlugin

Send error report to Github.

plugin_type = 'github'

__init__(**kwargs)

get_label(label)

submit_report(dataset, job, tool, **kwargs)

Submit the error report to sentry

galaxy.tools.error_reports.plugins.influxdb module

The module describes the influxdb error plugin plugin.

class galaxy.tools.error_reports.plugins.influxdb.InfluxDBPlugin(**kwargs)

Bases: galaxy.tools.error_reports.plugins.ErrorPlugin

Send error report to InfluxDB

plugin_type = 'influxdb'

__init__(**kwargs)

submit_report(dataset, job, tool, **kwargs)

Submit the error report to sentry

galaxy.tools.error_reports.plugins.json module

The module describes the json error plugin.

class galaxy.tools.error_reports.plugins.json.JsonPlugin(**kwargs)

Bases: galaxy.tools.error_reports.plugins.ErrorPlugin

Write error report to a JSON file.

plugin_type = 'json'

__init__(**kwargs)

submit_report(dataset, job, tool, **kwargs)

Write the report to a json file.

galaxy.tools.error_reports.plugins.sentry module

The module describes the sentry error plugin plugin.

class galaxy.tools.error_reports.plugins.sentry.SentryPlugin(**kwargs)

Bases: galaxy.tools.error_reports.plugins.ErrorPlugin

Send error report to Sentry.

plugin_type = 'sentry'

__init__(**kwargs)

submit_report(dataset, job, tool, **kwargs)

Submit the error report to sentry