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Source code for galaxy.managers.taggable

Mixins for Taggable model managers and serializers.

# from galaxy import exceptions as galaxy_exceptions

import logging

from galaxy.util import unicodify

log = logging.getLogger(__name__)

# TODO: work out the relation between serializers and managers and then fold these into the parent of the two
def _tag_str_gen(item):
    # TODO: which user is this? all?
    for tag in item.tags:
        tag_str = tag.user_tname
        if tag.value is not None:
            tag_str += ":" + tag.user_value
        yield tag_str

def _tags_to_strings(item):
    if not hasattr(item, 'tags'):
        return None
    return list(_tag_str_gen(item))

def _tags_from_strings(item, tag_handler, new_tags_list, user=None):
    # TODO: have to assume trans.user here...
    if not user:
        # raise galaxy_exceptions.RequestParameterMissingException( 'User required for tags on ' + str( item ) )
        # TODO: this becomes a 'silent failure' - no tags are set. This is a questionable approach but
        # I haven't found a better one for anon users copying items with tags
    # TODO: duped from tags manager - de-dupe when moved to taggable mixin
    tag_handler.delete_item_tags(user, item)
    new_tags_str = ','.join(new_tags_list)
    tag_handler.apply_item_tags(user, item, unicodify(new_tags_str, 'utf-8'))
    # TODO:!! does the creation of new_tags_list mean there are now more and more unused tag rows in the db?

[docs]class TaggableManagerMixin(object): #: class of TagAssociation (e.g. HistoryTagAssociation) tag_assoc = None # TODO: most of this can be done by delegating to the TagManager?
[docs] def get_tags(self, item): """ Return a list of tag strings. """ return _tags_to_strings(item)
[docs] def set_tags(self, item, new_tags, user=None): """ Set an `item`'s tags from a list of strings. """ return _tags_from_strings(item, self.app.tag_handler, new_tags, user=user)
# def tags_by_user( self, user, **kwargs ): # TODO: here or TagManager # pass
[docs]class TaggableSerializerMixin(object):
[docs] def add_serializers(self): self.serializers['tags'] = self.serialize_tags
[docs] def serialize_tags(self, item, key, **context): """ Return tags as a list of strings. """ return _tags_to_strings(item)
[docs]class TaggableDeserializerMixin(object):
[docs] def add_deserializers(self): self.deserializers['tags'] = self.deserialize_tags
[docs] def deserialize_tags(self, item, key, val, user=None, **context): """ Make sure `val` is a valid list of tag strings and assign them. Note: this will erase any previous tags. """ new_tags_list = self.validate.basestring_list(key, val) _tags_from_strings(item, self.app.tag_handler, new_tags_list, user=user) return item.tags
[docs]class TaggableFilterMixin(object):
[docs] def filter_has_partial_tag(self, item, val): """ Return True if any tag partially contains `val`. """ for tag_str in _tag_str_gen(item): if val in tag_str: return True return False
[docs] def filter_has_tag(self, item, val): """ Return True if any tag exactly equals `val`. """ for tag_str in _tag_str_gen(item): if val == tag_str: return True return False
def _add_parsers(self): self.fn_filter_parsers.update({ 'tag': { 'op': { 'eq' : self.filter_has_tag, 'has' : self.filter_has_partial_tag, } } })