Warning
This document is for an old release of Galaxy. You can alternatively view this page in the latest release if it exists or view the top of the latest release's documentation.
galaxy_test.driver package¶
Submodules¶
galaxy_test.driver.driver_util module¶
Scripts for drivers of Galaxy functional tests.
-
galaxy_test.driver.driver_util.
copy_database_template
(source, db_path)[source]¶ Copy a ‘clean’ sqlite template database.
From file or URL to specified path for sqlite database.
-
galaxy_test.driver.driver_util.
drive_test
(test_driver_class)[source]¶ Instantiate driver class, run, and exit appropriately.
-
galaxy_test.driver.driver_util.
database_conf
(db_path, prefix='GALAXY', prefer_template_database=False)[source]¶ Find (and populate if needed) Galaxy database connection.
-
galaxy_test.driver.driver_util.
get_webapp_global_conf
()[source]¶ Get the global_conf dictionary sent to
app_factory
.
-
galaxy_test.driver.driver_util.
nose_config_and_run
(argv=None, env=None, ignore_files=None, plugins=None)[source]¶ Setup a nose context and run tests.
Tests are specified by argv (defaulting to sys.argv).
-
galaxy_test.driver.driver_util.
setup_galaxy_config
(tmpdir, use_test_file_dir=False, default_install_db_merged=True, default_tool_data_table_config_path=None, default_shed_tool_data_table_config=None, default_job_config_file=None, enable_tool_shed_check=False, default_tool_conf=None, shed_tool_conf=None, datatypes_conf=None, update_integrated_tool_panel=False, prefer_template_database=False, log_format=None, conda_auto_init=False, conda_auto_install=False, use_shared_connection_for_amqp=False)[source]¶ Setup environment and build config for test Galaxy instance.
-
class
galaxy_test.driver.driver_util.
TestDriver
[source]¶ Bases:
object
Responsible for the life-cycle of a Galaxy-style functional test.
Sets up servers, configures tests, runs nose, and tears things down. This is somewhat like a Python TestCase - but different because it is meant to provide a main() endpoint.
galaxy_test.driver.integration_util module¶
Utilities for constructing Galaxy integration tests.
Tests that start an actual Galaxy server with a particular configuration in order to test something that cannot be tested with the default functional/api testing configuration.
-
class
galaxy_test.driver.integration_util.
IntegrationInstance
[source]¶ Bases:
galaxy_test.base.api.UsesApiTestCaseMixin
Unit test case with utilities for spinning up Galaxy.
-
prefer_template_database
= True¶
-
require_uwsgi
= False¶
-
isolate_galaxy_config
= True¶
-
classmethod
handle_galaxy_config_kwds
(galaxy_config_kwds)[source]¶ Extension point for subclasses to modify arguments used to configure Galaxy.
This method will be passed the keyword argument pairs used to call Galaxy Config object and can modify the Galaxy instance created for the test as needed.
-
-
class
galaxy_test.driver.integration_util.
IntegrationTestCase
(methodName='runTest')[source]¶ Bases:
galaxy_test.driver.integration_util.IntegrationInstance
,unittest.case.TestCase
Unit TestCase with utilities for spinning up Galaxy.
galaxy_test.driver.test_logging module¶
galaxy_test.driver.testcase module¶
-
class
galaxy_test.driver.testcase.
DrivenFunctionalTestCase
(methodName='runTest')[source]¶ Bases:
galaxy_test.base.testcase.FunctionalTestCase
Variant of FunctionalTestCase that can launch Galaxy instances.
-
galaxy_driver_class
¶ alias of
galaxy_test.driver.driver_util.GalaxyTestDriver
-
test_data_resolver
: galaxy.tool_util.verify.test_data.TestDataResolver¶
-