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galaxy.auth.providers package

Created on 15/07/2014

@author: Andrew Robinson

class galaxy.auth.providers.AuthProvider[source]

Bases: object

A base class for all Auth Providers.

plugin_type

Short string providing labelling this plugin

authenticate(email, username, password, options)[source]

Check that the user credentials are correct.

NOTE: Used within auto-registration to check it is ok to register this user.

Parameters:
  • email (str) – the user’s email address
  • username (str) – the user’s username
  • password (str) – the plain text password they typed
  • options (dict) – options provided in auth_config_file
Returns:

True: accept user, False: reject user and None: reject user and don’t try any other providers. str, str is the email and username to register with if accepting
Return type:

(bool, str, str)
authenticate_user(user, password, options)[source]

Same as authenticate() method, except an User object is provided instead of a username.

NOTE: used on normal login to check authentication and update user details if required.

Parameters:
  • user (galaxy.model.User) – the user to authenticate
  • password (str) – the plain text password they typed
  • options (dict) – options provided in auth_config_file
Returns:

True: accept user, False: reject user and None: reject user and don’t try any other providers
Return type:

bool

Submodules

galaxy.auth.providers.alwaysreject module

Created on 16/07/2014

@author: Andrew Robinson

class galaxy.auth.providers.alwaysreject.AlwaysReject[source]

Bases: galaxy.auth.providers.AuthProvider

A simple authenticator that just accepts users (does not care about their password).

plugin_type = 'alwaysreject'
authenticate(email, username, password, options)[source]

See abstract method documentation.

authenticate_user(user, password, options)[source]

See abstract method documentation.

galaxy.auth.providers.ldap_ad module

Created on 15/07/2014

@author: Andrew Robinson

class galaxy.auth.providers.ldap_ad.LDAP[source]

Bases: galaxy.auth.providers.AuthProvider

Attempts to authenticate users against an LDAP server.

If options include search-fields then it will attempt to search LDAP for those fields first. After that it will bind to LDAP with the username (formatted as specified).

plugin_type = 'ldap'
__init__()[source]
check_config(username, email, options)[source]
authenticate(email, username, password, options)[source]

See abstract method documentation.

authenticate_user(user, password, options)[source]

See abstract method documentation.

class galaxy.auth.providers.ldap_ad.ActiveDirectory[source]

Bases: galaxy.auth.providers.ldap_ad.LDAP

Effectively just an alias for LDAP auth, but may contain active directory specific logic in the future.

plugin_type = 'activedirectory'

galaxy.auth.providers.localdb module

Created on 16/07/2014

@author: Andrew Robinson

class galaxy.auth.providers.localdb.LocalDB[source]

Bases: galaxy.auth.providers.AuthProvider

Authenticate users against the local Galaxy database (as per usual).

plugin_type = 'localdb'
authenticate(email, username, password, options)[source]

See abstract method documentation.

authenticate_user(user, password, options)[source]

See abstract method documentation.

galaxy.auth.providers.pam_auth module

Created on 13/07/2015

Author Peter van Heusden (pvh@sanbi.ac.za)

class galaxy.auth.providers.pam_auth.PAM[source]

Bases: galaxy.auth.providers.AuthProvider

plugin_type = 'PAM'
authenticate(email, username, password, options)[source]
authenticate_user(user, password, options)[source]