galaxy.model.migrate.versions package ===================================== .. automodule:: galaxy.model.migrate.versions :members: :undoc-members: :show-inheritance: Submodules ---------- galaxy.model.migrate.versions.0001\_initial\_tables module ---------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0001_initial_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0002\_metadata\_file\_table module ---------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0002_metadata_file_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0003\_security\_and\_libraries module ------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0003_security_and_libraries :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0004\_indexes\_and\_defaults module ----------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0004_indexes_and_defaults :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0005\_cleanup\_datasets\_fix module ----------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0005_cleanup_datasets_fix :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0006\_change\_qual\_datatype module ----------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0006_change_qual_datatype :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0007\_sharing\_histories module ------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0007_sharing_histories :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0008\_galaxy\_forms module -------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0008_galaxy_forms :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0009\_request\_table module --------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0009_request_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0010\_hda\_display\_at\_authz\_table module ------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0010_hda_display_at_authz_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0011\_v0010\_mysql\_index\_fix module ------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0011_v0010_mysql_index_fix :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0012\_user\_address module -------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0012_user_address :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0013\_change\_lib\_item\_templates\_to\_forms module ---------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0013_change_lib_item_templates_to_forms :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0014\_pages module ------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0014_pages :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0015\_tagging module -------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0015_tagging :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0016\_v0015\_mysql\_index\_fix module ------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0016_v0015_mysql_index_fix :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0017\_library\_item\_indexes module ----------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0017_library_item_indexes :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0018\_ordered\_tags\_and\_page\_tags module ------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0018_ordered_tags_and_page_tags :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0019\_request\_library\_folder module ------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0019_request_library_folder :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0020\_library\_upload\_job module --------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0020_library_upload_job :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0021\_user\_prefs module ------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0021_user_prefs :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0022\_visualization\_tables module ---------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0022_visualization_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0023\_page\_published\_and\_deleted\_columns module --------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0023_page_published_and_deleted_columns :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0024\_page\_slug\_unique\_constraint module ------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0024_page_slug_unique_constraint :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0025\_user\_info module ----------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0025_user_info :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0026\_cloud\_tables module -------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0026_cloud_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0027\_request\_events module ---------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0027_request_events :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0028\_external\_metadata\_file\_override module ----------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0028_external_metadata_file_override :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0029\_user\_actions module -------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0029_user_actions :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0030\_history\_slug\_column module ---------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0030_history_slug_column :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0031\_community\_and\_workflow\_tags module ------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0031_community_and_workflow_tags :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0032\_stored\_workflow\_slug\_column module ------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0032_stored_workflow_slug_column :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0033\_published\_cols\_for\_histories\_and\_workflows module ------------------------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0033_published_cols_for_histories_and_workflows :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0034\_page\_user\_share\_association module ------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0034_page_user_share_association :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0035\_item\_annotations\_and\_workflow\_step\_tags module --------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0035_item_annotations_and_workflow_step_tags :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0036\_add\_deleted\_column\_to\_library\_template\_assoc\_tables module ----------------------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0036_add_deleted_column_to_library_template_assoc_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0037\_samples\_library module ----------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0037_samples_library :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0038\_add\_inheritable\_column\_to\_library\_template\_assoc\_tables module --------------------------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0038_add_inheritable_column_to_library_template_assoc_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0039\_add\_synopsis\_column\_to\_library\_table module ------------------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0039_add_synopsis_column_to_library_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0040\_page\_annotations module ------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0040_page_annotations :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0041\_workflow\_invocation module --------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0041_workflow_invocation :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0042\_workflow\_invocation\_fix module -------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0042_workflow_invocation_fix :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0043\_visualization\_sharing\_tagging\_annotating module -------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0043_visualization_sharing_tagging_annotating :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0044\_add\_notify\_column\_to\_request\_table module ---------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0044_add_notify_column_to_request_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0045\_request\_type\_permissions\_table module ---------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0045_request_type_permissions_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0046\_post\_job\_actions module ------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0046_post_job_actions :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0047\_job\_table\_user\_id\_column module ----------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0047_job_table_user_id_column :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0048\_dataset\_instance\_state\_column module --------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0048_dataset_instance_state_column :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0049\_api\_keys\_table module ----------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0049_api_keys_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0050\_drop\_cloud\_tables module -------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0050_drop_cloud_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0051\_imported\_col\_for\_jobs\_table module -------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0051_imported_col_for_jobs_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0052\_sample\_dataset\_table module ----------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0052_sample_dataset_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0053\_item\_ratings module -------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0053_item_ratings :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0054\_visualization\_dbkey module --------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0054_visualization_dbkey :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0055\_add\_pja\_assoc\_for\_jobs module --------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0055_add_pja_assoc_for_jobs :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0056\_workflow\_outputs module ------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0056_workflow_outputs :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0057\_request\_notify module ---------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0057_request_notify :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0058\_history\_import\_export module ------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0058_history_import_export :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0059\_sample\_dataset\_file\_path module ---------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0059_sample_dataset_file_path :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0060\_history\_archive\_import module ------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0060_history_archive_import :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0061\_tasks module ------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0061_tasks :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0062\_user\_openid\_table module -------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0062_user_openid_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0063\_sequencer\_table module ----------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0063_sequencer_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0064\_add\_run\_and\_sample\_run\_association\_tables module ------------------------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0064_add_run_and_sample_run_association_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0065\_add\_name\_to\_form\_fields\_and\_values module ----------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0065_add_name_to_form_fields_and_values :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0066\_deferred\_job\_and\_transfer\_job\_tables module ------------------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0066_deferred_job_and_transfer_job_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0067\_populate\_sequencer\_table module --------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0067_populate_sequencer_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0068\_rename\_sequencer\_to\_external\_services module ------------------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0068_rename_sequencer_to_external_services :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0069\_rename\_sequencer\_form\_type module ------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0069_rename_sequencer_form_type :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0070\_add\_info\_column\_to\_deferred\_job\_table module -------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0070_add_info_column_to_deferred_job_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0071\_add\_history\_and\_workflow\_to\_sample module ---------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0071_add_history_and_workflow_to_sample :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0072\_add\_pid\_and\_socket\_columns\_to\_transfer\_job\_table module --------------------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0072_add_pid_and_socket_columns_to_transfer_job_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0073\_add\_ldda\_to\_implicit\_conversion\_table module ------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0073_add_ldda_to_implicit_conversion_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0074\_add\_purged\_column\_to\_library\_dataset\_table module ------------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0074_add_purged_column_to_library_dataset_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0075\_add\_subindex\_column\_to\_run\_table module -------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0075_add_subindex_column_to_run_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0076\_fix\_form\_values\_data\_corruption module ------------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0076_fix_form_values_data_corruption :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0077\_create\_tool\_tag\_association\_table module -------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0077_create_tool_tag_association_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0078\_add\_columns\_for\_disk\_usage\_accounting module ------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0078_add_columns_for_disk_usage_accounting :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0079\_input\_library\_to\_job\_table module ------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0079_input_library_to_job_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0080\_quota\_tables module -------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0080_quota_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0081\_add\_tool\_version\_to\_hda\_ldda module ---------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0081_add_tool_version_to_hda_ldda :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0082\_add\_tool\_shed\_repository\_table module ----------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0082_add_tool_shed_repository_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0083\_add\_prepare\_files\_to\_task module ------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0083_add_prepare_files_to_task :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0084\_add\_ldda\_id\_to\_implicit\_conversion\_table module ----------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0084_add_ldda_id_to_implicit_conversion_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0085\_add\_task\_info module ---------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0085_add_task_info :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0086\_add\_tool\_shed\_repository\_table\_columns module -------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0086_add_tool_shed_repository_table_columns :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0087\_tool\_id\_guid\_map\_table module --------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0087_tool_id_guid_map_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0088\_add\_installed\_changeset\_revison\_column module ------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0088_add_installed_changeset_revison_column :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0089\_add\_object\_store\_id\_columns module -------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0089_add_object_store_id_columns :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0090\_add\_tool\_shed\_repository\_table\_columns module -------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0090_add_tool_shed_repository_table_columns :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0091\_add\_tool\_version\_tables module --------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0091_add_tool_version_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0092\_add\_migrate\_tools\_table module --------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0092_add_migrate_tools_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0093\_add\_job\_params\_col module ---------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0093_add_job_params_col :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0094\_add\_job\_handler\_col module ----------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0094_add_job_handler_col :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0095\_hda\_subsets module ------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0095_hda_subsets :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0096\_openid\_provider module ----------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0096_openid_provider :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0097\_add\_ctx\_rev\_column module ---------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0097_add_ctx_rev_column :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0098\_genome\_index\_tool\_data\_table module --------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0098_genome_index_tool_data_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0099\_add\_tool\_dependency\_table module ----------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0099_add_tool_dependency_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0100\_alter\_tool\_dependency\_table\_version\_column module ------------------------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0100_alter_tool_dependency_table_version_column :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0101\_drop\_installed\_changeset\_revision\_column module --------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0101_drop_installed_changeset_revision_column :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0102\_add\_tool\_dependency\_status\_columns module --------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0102_add_tool_dependency_status_columns :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0103\_add\_tool\_shed\_repository\_status\_columns module --------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0103_add_tool_shed_repository_status_columns :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0104\_update\_genome\_downloader\_job\_parameters module -------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0104_update_genome_downloader_job_parameters :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0105\_add\_cleanup\_event\_table module --------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0105_add_cleanup_event_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0106\_add\_missing\_indexes module ---------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0106_add_missing_indexes :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0107\_add\_exit\_code\_to\_job\_and\_task module ------------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0107_add_exit_code_to_job_and_task :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0108\_add\_extended\_metadata module ------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0108_add_extended_metadata :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0109\_add\_repository\_dependency\_tables module ------------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0109_add_repository_dependency_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0110\_add\_dataset\_uuid module ------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0110_add_dataset_uuid :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0111\_add\_job\_destinations module ----------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0111_add_job_destinations :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0112\_add\_data\_manager\_history\_association\_and\_data\_manager\_job\_association\_tables module --------------------------------------------------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0112_add_data_manager_history_association_and_data_manager_job_association_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0113\_update\_migrate\_tools\_table module ------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0113_update_migrate_tools_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0114\_update\_migrate\_tools\_table\_again module ------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0114_update_migrate_tools_table_again :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0115\_longer\_user\_password\_field module ------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0115_longer_user_password_field :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0116\_drop\_update\_available\_col\_add\_tool\_shed\_status\_col module ----------------------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0116_drop_update_available_col_add_tool_shed_status_col :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0117\_add\_user\_activation module ---------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0117_add_user_activation :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0118\_add\_hda\_extended\_metadata module ----------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0118_add_hda_extended_metadata :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0119\_job\_metrics module ------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0119_job_metrics :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0120\_dataset\_collections module --------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0120_dataset_collections :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0121\_workflow\_uuids module ---------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0121_workflow_uuids :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0122\_grow\_mysql\_blobs module ------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0122_grow_mysql_blobs :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0123\_add\_workflow\_request\_tables module ------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0123_add_workflow_request_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0124\_job\_state\_history module -------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0124_job_state_history :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0125\_workflow\_step\_tracking module ------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0125_workflow_step_tracking :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0126\_password\_reset module ---------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0126_password_reset :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0127\_output\_collection\_adjustments module -------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0127_output_collection_adjustments :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0128\_session\_timeout module ----------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0128_session_timeout :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0129\_job\_external\_output\_metadata\_validity module ------------------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0129_job_external_output_metadata_validity :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0130\_change\_pref\_datatype module ----------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0130_change_pref_datatype :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0131\_subworkflow\_and\_input\_parameter\_modules module -------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0131_subworkflow_and_input_parameter_modules :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0132\_add\_lastpasswordchange\_to\_user module ---------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0132_add_lastpasswordchange_to_user :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0133\_add\_dependency\_column\_to\_job module --------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0133_add_dependency_column_to_job :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0134\_hda\_set\_deleted\_if\_purged module ------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0134_hda_set_deleted_if_purged :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0135\_add\_library\_tags module ------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0135_add_library_tags :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0136\_collection\_and\_workflow\_state module --------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0136_collection_and_workflow_state :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0137\_add\_copied\_from\_job\_id\_column module ----------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0137_add_copied_from_job_id_column :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0138\_add\_hda\_version module ------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0138_add_hda_version :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0139\_add\_history\_dataset\_association\_history\_table module --------------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0139_add_history_dataset_association_history_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0140\_add\_dataset\_version\_to\_job\_to\_input\_dataset\_association\_table module ----------------------------------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0140_add_dataset_version_to_job_to_input_dataset_association_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0141\_add\_oidc\_tables module ------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0141_add_oidc_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0142\_change\_numeric\_metric\_precision module ----------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0142_change_numeric_metric_precision :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0143\_add\_cloudauthz\_tables module ------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0143_add_cloudauthz_tables :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0144\_add\_cleanup\_event\_user\_table module --------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0144_add_cleanup_event_user_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0145\_add\_workflow\_step\_input module --------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0145_add_workflow_step_input :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0146\_workflow\_paths module ---------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0146_workflow_paths :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0147\_job\_messages module -------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0147_job_messages :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0148\_add\_checksum\_table module --------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0148_add_checksum_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0149\_dynamic\_tools module --------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0149_dynamic_tools :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0150\_add\_create\_time\_field\_for\_cloudauthz module ------------------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0150_add_create_time_field_for_cloudauthz :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0151\_add\_worker\_process module --------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0151_add_worker_process :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0152\_add\_metadata\_file\_uuid module -------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0152_add_metadata_file_uuid :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0153\_add\_custos\_authnz\_token\_table module ---------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0153_add_custos_authnz_token_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0154\_created\_from\_basename module ------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0154_created_from_basename :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0155\_job\_galaxy\_version module --------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0155_job_galaxy_version :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0156\_add\_interactivetools module ---------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0156_add_interactivetools :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0157\_rework\_dataset\_validation module ---------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0157_rework_dataset_validation :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0158\_workflow\_reports module ------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0158_workflow_reports :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0159\_add\_job\_external\_id\_index module ------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0159_add_job_external_id_index :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0160\_hda\_set\_deleted\_if\_purged\_again module ------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0160_hda_set_deleted_if_purged_again :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0161\_add\_workflow\_invocation\_output\_table module ----------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0161_add_workflow_invocation_output_table :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0162\_job\_only\_pjas module ---------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0162_job_only_pjas :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0163\_worker\_process\_pid module --------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0163_worker_process_pid :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0164\_page\_format module ------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0164_page_format :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0165\_add\_content\_update\_time module --------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0165_add_content_update_time :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0166\_job\_state\_summary\_view module -------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0166_job_state_summary_view :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0167\_add\_job\_to\_input\_dataset\_collection\_element\_association module --------------------------------------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0167_add_job_to_input_dataset_collection_element_association :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0168\_stored\_workflow\_hidden\_col module ------------------------------------------------------------------------ .. automodule:: galaxy.model.migrate.versions.0168_stored_workflow_hidden_col :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0169\_add\_missing\_indexes module ---------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0169_add_missing_indexes :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0170\_add\_more\_missing\_indexes module ---------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0170_add_more_missing_indexes :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0171\_schemaorg\_metadata module -------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0171_schemaorg_metadata :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.0172\_it\_entrypoint\_requires\_domain module --------------------------------------------------------------------------- .. automodule:: galaxy.model.migrate.versions.0172_it_entrypoint_requires_domain :members: :undoc-members: :show-inheritance: galaxy.model.migrate.versions.util module ----------------------------------------- .. automodule:: galaxy.model.migrate.versions.util :members: :undoc-members: :show-inheritance: